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EBI DbfetchID BC149796; SV 1; linear; mRNA; STD; MAM; 2805 BP. XX AC BC149796; XX DT 12-JUL-2007 (Rel. 92, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Bos taurus chondroitin sulfate synthase 3, mRNA (cDNA clone IMAGE:8472680), DE partial cds. XX KW . XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-2805 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 302 Row: d Column: 5. XX FH Key Location/Qualifiers FH FT source 1..2805 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-29" FT /clone="IMAGE:8472680" FT /tissue_type="Fetal skin , female fetus 6 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene <1..2805 FT /gene="CHSY3" FT CDS <1..1942 FT /codon_start=2 FT /gene="CHSY3" FT /product="CHSY3 protein" FT /db_xref="GOA:A6QQE8" FT /db_xref="InterPro:IPR008428" FT /db_xref="UniProtKB/TrEMBL:A6QQE8" FT /protein_id="AAI49797.1" FT /translation="KKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSS FT KPLYLGQTGLGNIEELGKLGLEPGENFCMGGPGMIFSHEVLRRMVPHIGECLREMYTTH FT EDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRP FT AYQYRLHNYMLSRKISELRYRTIQLHRESALMSKLSNSEVSKEDQQLGVMPSFNHFQPR FT ERDEVIEWEFLTGKLLYSASENQPPRQSINSILRTALDDTVLQVMEMINENAKTRGRLI FT DFKEIQYGYRRVDPMHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFRETE FT ELDVNSLVESINSDTQSFSFISNSLKILSSFQGAKEVGGHSEKKIHILVPLIGRYDTFL FT RFMENFENTCLIPKQNVKLVIILFSKDSGQDSNKHIELIQEYQNKYPKAEITLIPMKGE FT FSRGLGLEMGSSQFDNDTLLLFCDVDLIFRGDFLQRCRDNTIQGQQVYYPIIFSQYDPK FT VTNGGSPPTDDDFVFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYN FT KVILSGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTVQLAELWLEK FT HLGVRYNRTLS" XX SQ Sequence 2805 BP; 861 A; 539 C; 600 G; 805 T; 0 other; gaaaaagtcc ttcatgatga tcaagtacat gcacgaccac tacctggaca agtatgagtg 60 gttcatgcgc gccgacgacg atgtctacat taaaggtgat aagttggaag agtttcttag 120 atcactgaat agcagcaagc ccctctacct gggccagact ggtctgggga atattgaaga 180 actcggaaag ctggggctgg agcctgggga gaacttctgc atgggaggac ctggcatgat 240 cttcagccac gaggttctca ggaggatggt gccacatatc ggtgaatgcc tcagagaaat 300 gtacacgact catgaggacg tggaagtagg cagatgtgtt cgacgtttcg gcgggactca 360 gtgtgtctgg tcttatgaga tgcagcaact gttccatgaa aattatgaac acaatcgcaa 420 gggttatatc caagaccttc acaacagcaa aatccatgca gccataacac ttcatccaaa 480 caaaaggccc gcctaccaat acaggcttca taattacatg ctcagccgca aaatttctga 540 actgcgctac cgcaccatcc agctccaccg ggagagtgcg ctgatgagca agcttagtaa 600 tagcgaagtg agcaaagagg accagcagct gggagtaatg ccttctttca accacttcca 660 gcctcgggag agagatgaag tgatagaatg ggagttcctg acagggaaac tcctttactc 720 ggcatctgag aaccagcctc ctcgacagag catcaatagc atcctgagaa cagcgctgga 780 tgatactgtc ctacaggtga tggagatgat caatgagaat gccaagacga gaggacggct 840 cattgacttc aaagaaattc aatatggcta ccgcagggtt gatcccatgc atggggtgga 900 gtacattttg gatttacttc tcttatacaa aagacacaag gggaggaaac tgactgtgcc 960 agtaagacgc catgcctatc ttcagcagtt gttcagcaag cctttcttca gagaaactga 1020 agagctagat gtcaacagtc ttgtagagag tattaacagt gacactcaat cattctcctt 1080 tatatcgaat tctttaaaga tactgtcttc ttttcaaggt gccaaagaag tgggagggca 1140 cagtgaaaag aaaatacaca ttcttgtccc tctcattgga aggtatgaca ctttcttgag 1200 attcatggag aactttgaaa acacttgtct tatcccaaag cagaatgtaa aactggtcat 1260 catccttttc agtaaggatt ctggccaaga ttccaacaag catattgagc ttatacaaga 1320 atatcagaac aagtacccca aagcagaaat caccctgatc cccatgaagg gggagttttc 1380 cagaggtctt ggtcttgaaa tgggatcttc ccagtttgac aatgatactt tgctgctatt 1440 ttgtgatgtt gacttgatct tcagaggaga ttttctccaa cgatgtagag acaatacaat 1500 tcagggacaa caggtgtact accccatcat ctttagccag tatgacccaa aggtaaccaa 1560 tggggggagc cctccaaccg atgacgactt tgtcttctca aagaagactg gattctggag 1620 agattatgga tatggaatta cctgtattta taaaagtgat cttctgggag caggtggatt 1680 tgatacctca atacaaggct ggggactgga agatgtagat ctctacaata aagtcattct 1740 atctggcttg aggcccttca gaagtcaaga agtaggagtg gtccacattt tccatccagt 1800 tcattgtgac cctaacttgg accctaagca gtataagatg tgcttaggat ccaaggcaag 1860 tacttttgcc tcaaccgtgc aactggctga actatggctg gaaaaacatt tgggtgtcag 1920 gtacaatcga actctctcct gacaatccag gcaacacata ttgccttttt taaaggggag 1980 tttacctcat tgttggttgt tgttgtttaa ttttattgtt atttttatta ttataattat 2040 tattgttata attttatttt gttgtccagg tcttaaacta ctcttggttg tcttccaaag 2100 agtgtttgtt gacctcaaac aagaagagtc tgcagttcac tgatatttca gatttctact 2160 gaagtcaata ggcatattac ttttatatat ctttatttga gattgagtta aatcgtggca 2220 atcaaatgac ttttgaagct cattcaacat gagagacagc ttagaagaat gttctcttgg 2280 ggctttaaga tgcaatatcg acttttcttt cgtttgtcaa attcaatgtg atacaaatat 2340 ttactggtga aaggtaccac aaaagtgctt tatgcttcct atggggaagg gactctgtaa 2400 cataaacttg agttttgtaa tttatacaag gacttaaata tatagacaat aattttcttc 2460 atctttagga tttttaaagt aaatgaacac ttatgattgt aagtttattt tttaaaaaaa 2520 agttttaaaa atttgaggag ttttggtcca cgagcaaccg gtactggcta ccctggtctt 2580 atgacaatta tcttactcct cacaacagtc tgctataaat gcgaatgaac tttattttct 2640 caaggaaata tgatttaatt aaatattcat gtacatttta gaagctttat gaaacaatgt 2700 ccttcatttg ctggcaagaa gataaaatat gacagaacct ggttatttat aataaaacag 2760 gtatgacagt attctttttc aaaaaaaaaa aaaaaaaaaa aaaaa 2805 // |
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