EBI Dbfetch

ID   BC149772; SV 1; linear; mRNA; STD; MAM; 1929 BP.
XX
AC   BC149772;
XX
DT   12-JUL-2007 (Rel. 92, Created)
DT   05-AUG-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Bos taurus similar to asparagine-linked glycosylation 9 protein, mRNA (cDNA
DE   clone IMAGE:8217666), partial cds.
XX
KW   .
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1929
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 302 Row: b Column: 2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1929
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-26"
FT                   /clone="IMAGE:8217666"
FT                   /tissue_type="Thalamus, female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            <1..1929
FT                   /gene="LOC504346"
FT   CDS             <1..1661
FT                   /codon_start=3
FT                   /gene="LOC504346"
FT                   /product="LOC504346 protein"
FT                   /db_xref="GOA:A6QQD3"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:A6QQD3"
FT                   /protein_id="AAI49773.1"
FT                   /translation="TAFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGKGFQTWE
FT                   YSPAYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCK
FT                   KFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSFAVLGVAAG
FT                   AILGWPFSAALGLPIAFDLLIMKQRWKSFFHWSLVALVLFLVPVVGIDSYYYGKLVIAP
FT                   LNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVVFALALLVLPLTSLMEYLLQRFHV
FT                   QNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQ
FT                   RYRLEHYTVTSNWLALGTLFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHSV
FT                   PEGRPVNVCVGKEWHRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRTVPTDMN
FT                   DQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSNREEWINLAYRPFLDASRSSRLL
FT                   RAFYVPFLSDQYTVYANYTILKPRKAKQTRKRSGG"
XX
SQ   Sequence 1929 BP; 557 A; 438 C; 395 G; 539 T; 0 other;
     ctactgcttt caagtgtttg ctctcagcaa ggttatgtgc tgccctgctg agcaacatct        60
     cggactgtga cgaaacattc aactactggg aaccaacaca ctacctcatc tatgggaagg       120
     ggtttcagac ttgggaatat tctccagctt atgccattcg ctcgtatgct tacctgttgc       180
     ttcatgcctg gccagctgca tttcatgcga gaattttaca aacgaataag attcttgtct       240
     tttacttttt acgatgtctg ctggcttttg tgagctgtat atgtgaactt tacttttaca       300
     aggctgtgtg taagaagttt gggctgcatg tgagtcgaat gatgctagcc ttcttggttc       360
     tcagcactgg catgttttgc tcgtcatcag cattccttcc tagcagcttc tgtatgtaca       420
     ctaccttgat agccatgact ggctggtata tggacaaaac ttcctttgct gtgcttggag       480
     tagccgctgg ggccatccta ggctggccat tcagtgcggc tctcggttta cctattgcct       540
     ttgatctgct gatcatgaaa caaaggtgga agagtttctt tcattggtcg ttggttgctc       600
     tagtgctgtt tctggtgcct gtggtgggca ttgacagcta ctattatggg aagctggtga       660
     ttgcaccact caacatagtt ttgtataatg tttttactcc tcatggacct gatctttatg       720
     gcacagagcc ttggtatttc tatttaatta atggatttct gaatttcaat gtagtctttg       780
     ctttagccct cctggtctta ccactgactt ctctcatgga atacctactg cagagatttc       840
     atgttcagaa tttaggccac ccatattggc ttaccttggc tccaatgtat atttggttta       900
     taattttctt catccagcct cacaaagagg agagatttct tttccctgtg tatccactta       960
     tctgtctctg tggtgctgtg gccctttctg cacttcagaa atgttaccac ttcgtgtttc      1020
     agcgataccg cctggagcat tataccgtga cgtcgaattg gctggcgtta ggaacactct      1080
     tcctgttcgg gctcctgtct ttttctcgct ctgtggcgct gttcagaggg tatcacggac      1140
     cccttgatct gtatccagaa ttttatcgaa ttgccacaga ccccaccatc cacagtgttc      1200
     ctgaaggccg gcccgtcaat gtctgtgttg ggaaagagtg gcatcgcttc cccagcagct      1260
     tccttctgcc cgacaattgg cagcttcagt tcatcccgtc agagttcaga ggccagttac      1320
     caaaaccttt tgcagaggga ccactggcca cccggactgt tcccactgac atgaatgacc      1380
     agaacctaga ggagccatcc agatacattg acatcagtaa atgccattat ttagtggatt      1440
     tggacaccat gagagaaaca ccccgggagc caaaatattc atccaataga gaagaatgga      1500
     tcaacttggc ctacagacca ttccttgatg cttctaggtc ttcaaggttg ttgcgggcat      1560
     tctacgttcc cttcctgtca gatcagtata cagtgtatgc aaactatacc atcctcaaac      1620
     cccggaaagc aaagcaaacc aggaagagaa gcggaggtta gcatcatgcc tgtggtccca      1680
     gagaactccc atcctgtcca ctggggatcc cactgacagg acaccctcca agccaccgct      1740
     tgtaccgtgt gtaataaagg cgtgtgacac gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1800
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1860
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1920
     aaaaaaaaa                                                              1929
//