EBI Dbfetch

ID   BC149682; SV 1; linear; mRNA; STD; MAM; 1555 BP.
XX
AC   BC149682;
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DT   12-JUL-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE   Bos taurus proline dehydrogenase (oxidase) 2, mRNA (cDNA clone MGC:152359
DE   IMAGE:8048586), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1555
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000031772; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000045048; Bos_taurus.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series:  Plate:  Row:  Column: 0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1555
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-04"
FT                   /clone="MGC:152359 IMAGE:8048586"
FT                   /tissue_type="Liver, 6 month old female calf, Crossbred x
FT                   Angus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1555
FT                   /gene="PRODH2"
FT   CDS             93..1478
FT                   /codon_start=1
FT                   /gene="PRODH2"
FT                   /product="PRODH2 protein"
FT                   /db_xref="GOA:A6QQ74"
FT                   /db_xref="InterPro:IPR002872"
FT                   /db_xref="InterPro:IPR015659"
FT                   /db_xref="UniProtKB/Swiss-Prot:A6QQ74"
FT                   /protein_id="AAI49683.1"
FT                   /translation="MLQACRVLRSRAGPSPGSWQPLSFDGGAFHLKSIGELTRALLVLR
FT                   LCAWPPLVTHGLALQAWSQRLLGSRLSGALLRASIYGQFVAGETAEEVRSCVLQLQNLG
FT                   LRPLLAVPTEEEPDSAVKTGEAWYEGNLSAMLRCVDLSRGLLETPDPTGNALMQLKMTA
FT                   LMSTRLCKQLTSWVRRPGDSLELSPERLAEAMDSGQDLQVSCLNTEQTRHLQASLSRLH
FT                   RVVQHARAQRVRLLVDAEYTSLNPALSLLVAALATRWNSSGEGGPWVWNTYQAYLKDTY
FT                   ERLRWDAEAADRAGLAFGVKLVRGAYLDKERETARLQGTEDPTQPDYEATSQSYSRCLE
FT                   LMLTQVSHRGPMCHLMVASHNEDSVRQATKRMWELGIPPDGPVCFGQLLGMCDHVSLAL
FT                   GQAGYAVYKSIPYGSLEEVIPYLIRRAQENRSVLRGARREQELLSQELRRRLLGRGLRV
FT                   SPH"
XX
SQ   Sequence 1555 BP; 294 A; 465 C; 500 G; 296 T; 0 other;
     gagtcactgt ccctggccgg gcaaggggca ctgggtagac cagctgcctc caaagccccc        60
     tgctccagtg tggaagtggt gaagggttcc tgatgcttca ggcctgtcgt gtgctccgct       120
     cccgagctgg cccctcccca gggagctggc agcccctcag ctttgatggt ggggccttcc       180
     acctcaagag cataggagaa ctgacccgag ctttgctggt gctacggctg tgtgcctggc       240
     cgcctctggt cacccatggc ctggcgctcc aagcctggtc tcagcgactc ctgggctccc       300
     ggctctccgg tgcgcttctc cgagcatcca tctacgggca gtttgtggct ggtgagaccg       360
     ctgaggaggt gaggagctgt gtcctacagc tccagaacct aggcctgcgg cctctgctgg       420
     cagtgcccac tgaggaggag ccagactcgg ctgtcaagac gggtgaggcc tggtatgaag       480
     ggaacctcag tgcgatgctg cgatgcgtgg acctgtcacg aggcctcctg gagacccctg       540
     acccaacggg aaatgccctg atgcagctga agatgacggc gctgatgagc actcggctct       600
     gtaagcagct cacctcgtgg gtccgaaggc caggggattc tttggagctg agccccgaga       660
     ggctggcaga agccatggac tctggacagg acctccaggt ctcctgcctc aacaccgagc       720
     aaacacgaca cctccaggcc tccctgagtc gtttgcaccg ggtggtacag cacgcccggg       780
     cccagcgcgt gaggctcctg gtggatgccg agtacacctc tctgaacccg gcactctctc       840
     tgctggtggc tgccctggcc acgcgctgga acagctccgg ggaaggcggg ccctgggtgt       900
     ggaacactta ccaggcctat ctgaaggaca cctatgagcg gctgaggtgg gacgctgagg       960
     ccgcagacag ggctggcctg gcctttgggg tgaagttggt acgaggggcg tatctggaca      1020
     aggagagaga gacggcccgg ctccagggaa ccgaagatcc cactcagcct gactatgagg      1080
     ctaccagtca gagttacagc cgctgtctgg agctgatgct gacccaggtg tcccatcgtg      1140
     gccccatgtg ccacctcatg gtggcttccc acaatgagga ctctgtccgc caggcaacca      1200
     agcgcatgtg ggagctgggc attcctccag atgggcctgt ctgctttgga caacttctgg      1260
     ggatgtgtga ccatgtctcc ttggcactgg ggcaggctgg ctatgctgtg tacaagtcca      1320
     tcccctatgg ctctctggag gaggtgatcc cttacctgat ccggagggcc caggagaacc      1380
     gaagtgtact acggggtgcc cgcagagaac aggagctgct cagccaagaa cttcgacgga      1440
     ggctgctggg gcggggcctg agggtatccc cccattagca cccccaggag tcacgtggtc      1500
     aataaagttc ttgagctgtt gcccaggcag ctgccttgca aaaaaaaaaa aaaaa           1555
//