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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC149378; SV 1; linear; mRNA; STD; MAM; 1454 BP.
XX
AC   BC149378;
XX
DT   12-JUL-2007 (Rel. 92, Created)
DT   12-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE   Bos taurus pyrroline-5-carboxylate reductase-like, mRNA (cDNA clone
DE   MGC:148906 IMAGE:8261042), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1454
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000016810; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000022364; Bos_taurus.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: S. Lobo, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 292 Row: f Column: 9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1454
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-22"
FT                   /clone="MGC:148906 IMAGE:8261042"
FT                   /tissue_type="Fetal cerebellum, Hereford, 6 month male
FT                   fetus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1454
FT                   /gene="PYCRL"
FT   CDS             23..949
FT                   /codon_start=1
FT                   /gene="PYCRL"
FT                   /product="pyrroline-5-carboxylate reductase-like"
FT                   /db_xref="GOA:Q58D08"
FT                   /db_xref="InterPro:IPR000304"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q58D08"
FT                   /protein_id="AAI49379.1"
FT                   /translation="MAAAAEESGWRRVGFVGAGRMAEAIAQGLIQAGKVEAEHVLASAP
FT                   SDRNLCRFRAMGCQTTHSNLEVLHSCSLVFFATKPHILPAVLVEVAPAVTAEHILVSVA
FT                   AGVSLSTLEKLLPPMARVLRVSPNLPCIVQEGAMVMARGCCAGSYEAQLLRSLLEACGQ
FT                   CEEVPEAQVDVHTGLSGSGVAFVCAFSEALAEGAIKMGMPSGLAHRIAAQTLLGTAKVL
FT                   LQKGQHPAQLRTDVCTPGGTTIYGLHVLEQGGLRATAMSAVEAATCRARELSRNPSPVV
FT                   AQVPSVLQALQGEGALAHREHSSVARS"
XX
SQ   Sequence 1454 BP; 342 A; 434 C; 431 G; 247 T; 0 other;
     gggggcgcgg cgcagcggcg tgatggcggc ggcggcggag gagtccggct ggaggcgagt        60
     gggcttcgtg ggcgcgggcc gcatggcgga ggccatcgcc cagggcctca tccaagcagg       120
     aaaagtggaa gctgagcacg tgctggccag cgcgccctcc gacaggaacc tctgccgttt       180
     ccgggccatg ggctgccaga ccacccactc caacctggag gtgctgcata gctgctccct       240
     cgtcttcttc gccaccaaac cccacatcct gccggctgtg ctggtggagg tggctcctgc       300
     cgtcactgct gagcacatct tggtgtctgt ggccgccggg gtgtccctaa gcaccctgga       360
     gaagctgctg cccccgatgg ctcgggtgct cagggtctca cccaacctgc cctgcatcgt       420
     ccaggagggt gccatggtga tggcgcgggg ctgctgcgct gggagctatg aggcccagct       480
     cctgcggtcc ctgctggagg cctgtgggca gtgcgaggag gtgcctgagg cccaggtgga       540
     cgtccatacc ggcctcagcg gcagcggcgt agcctttgtg tgtgccttct ccgaggcctt       600
     ggccgaaggt gccatcaaaa tgggcatgcc cagtggcctg gcccaccgca ttgctgccca       660
     gaccctgctg gggacggcca aggtgctttt gcagaagggg cagcacccag ctcagctgcg       720
     gactgacgtg tgcacgccgg gcggcactac catctacggg ctccatgtgc tggagcaagg       780
     cgggctgcgg gccacggcca tgagcgctgt ggaggctgcc acctgccggg ccagggagct       840
     cagcaggaac ccctcccccg tggtggctca ggtcccctct gtcctgcaag ccctgcaggg       900
     agaaggggcc ctggcccaca gggaacacag cagtgtggcc cgttcctaga ccctaagctc       960
     ctgtggcctg gcctctgcag gatttggttc tgaacatgtc tgtgaaggga ccaacaagcc      1020
     aggaaaacca gaaacgtgga gcctttgttg ggggaccgcc ccatcccaca caggcccaag      1080
     tgctagagtc ccttcctgcc acctgccagc tgcggggcgt ctgtgaacag ggctgatgga      1140
     ccaccggcca cctgcactct gccgcctggc ctcaagcccc tccctaagtt ccagcctcag      1200
     tgtcccactg gccctcagcc aggcactgct tgtctgaccc cagcccttgt actagttaga      1260
     agggtcagcc agagtccatt tcttcacctt ttttttttaa cctttaaaat ggaaataaag      1320
     atgctgtcct ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1380
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa      1440
     aaaaaaaaaa aaaa                                                        1454
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