EBI Dbfetch

ID   BC149097; SV 1; linear; mRNA; STD; MAM; 1888 BP.
XX
AC   BC149097;
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DT   12-JUL-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Bos taurus alcohol dehydrogenase, iron containing, 1, mRNA (cDNA clone
DE   MGC:151687 IMAGE:8222978), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1888
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000004476; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000005874; Bos_taurus.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series:  Plate:  Row:  Column: 0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1888
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-28"
FT                   /clone="MGC:151687 IMAGE:8222978"
FT                   /tissue_type="Cerebral cortex , female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1888
FT                   /gene="ADHFE1"
FT   CDS             9..1409
FT                   /codon_start=1
FT                   /gene="ADHFE1"
FT                   /product="ADHFE1 protein"
FT                   /db_xref="GOA:A6QP15"
FT                   /db_xref="InterPro:IPR018211"
FT                   /db_xref="UniProtKB/Swiss-Prot:A6QP15"
FT                   /protein_id="AAI49098.1"
FT                   /translation="MAAARSRVVHLLRLLQRAACQCPSHSHTYSQAPGLSPSGKTTDYA
FT                   FEMAVSTIRYGAGVTKEVGMDLQSMGAKNVCLMTDKNLSQLPPVQTVMDSLVKNGINFK
FT                   VYDHVRVEPTDTSFMEAIEFAKKGAFDAFLAVGGGSTIDTCKAANLYSSSPDSDFLDYV
FT                   NAPIGKGKPVTVPLKPLIAVPTTSGTGSETTGVAIFDYEHLKVKTGIASRAIKPTLGLI
FT                   DPLHTLHMPERVVANSGFDVLCHALESYTALPYHMRSPCPSSPITRPAYQGSNPISDIW
FT                   AVHALRIVAKYLKRAIRNPDDLEARSNMHLASAFAGIGFGNAGVHLCHGMSYPISGLVK
FT                   TYKAKDYNVDHPLVPHGLSVVLTSPAVFTFTSQMFPERHLEVAEILGADTRTARRPDAG
FT                   PVLADTLRKFLFDLDVDDGLAAIGYSKADIPELVKGTLPQERVTKLAPRPQSEEDLSAL
FT                   FEASMKLY"
XX
SQ   Sequence 1888 BP; 518 A; 488 C; 411 G; 471 T; 0 other;
     gctcagccat ggccgccgct cgctctcggg tagtgcactt gctgaggctt ctgcaacgcg        60
     cagcatgcca gtgcccgagt cattctcata cttattccca agctcctgga ctttcacctt       120
     ctgggaaaac aacagattat gccttcgaga tggctgtttc aactattaga tatggagcag       180
     gagttacaaa ggaagtgggc atggacctac aaagcatggg tgctaaaaat gtttgtttga       240
     tgacagacaa gaacctctcc caactccctc ctgtacagac agtgatggat tccctagtga       300
     agaatggcat aaactttaag gtttatgatc atgtgagagt ggaaccaact gatacaagct       360
     tcatggaagc cattgaattt gccaaaaagg gagctttcga tgccttcctg gccgtgggtg       420
     gcggttccac catagacacc tgtaaagccg ctaatctgta ttcatccagc cctgactctg       480
     acttcctaga ctacgtcaat gcccccattg ggaagggaaa gcctgtgact gtgcctctga       540
     aacctctgat cgcagttcca actacctcag gcactgggag cgaaactacc ggagttgcca       600
     tttttgacta cgaacacttg aaagtaaaaa ctggcattgc ttcgcgagcc atcaaaccca       660
     cactcggcct gattgatcct ctacacaccc tgcacatgcc tgagcgggtg gtcgccaaca       720
     gtggcttcga tgtgctctgc cacgccctgg agtcctacac tgccctccca tatcacatgc       780
     ggagcccctg cccttcaagc cctatcactc ggccagccta ccagggcagc aaccccatca       840
     gtgacatctg ggcagtccac gcactgcgga tcgttgccaa gtatctgaag agggctatca       900
     gaaatcctga tgatcttgaa gcaaggtcta atatgcactt ggcaagtgct tttgctggca       960
     ttggctttgg aaatgctggt gttcatctat gccatggaat gtcttaccca atttctggct      1020
     tagtgaagac ttataaagca aaggattaca atgtggatca tcccctggtg cctcatggcc      1080
     tttctgtggt gctcacctcc ccagcagtgt tcacatttac atcacagatg tttcctgagc      1140
     ggcacttgga agtggcagaa atattgggag ctgacacccg cactgccagg aggccagatg      1200
     ctgggcctgt cttggcagac acgctgcgga aattcttatt cgatctggat gtggatgacg      1260
     gcctggctgc cattggctac tccaaggccg acatccccga gctggtgaaa ggaacgctgc      1320
     cccaggaaag agtcaccaag cttgcaccac gccctcagtc agaagaggat ctatctgctc      1380
     tgtttgaagc atcaatgaaa ctgtattaat tttcattttc actgaaagaa ctacccttgg      1440
     ccatcatagt tctgataaca gaagttgatc tagcaagaat tttgtctttt cacctccaca      1500
     tataactccc tcgttaccag cttgaatgtg atataaattt atcctgtaga agattctctg      1560
     atgctccaaa tccagctact tccatagggc agcctggaca aacgcccacc atgatggacc      1620
     ctcagacaga cttcagggat ccatgttctt accccaaacc ctgcagactg cccttgctcc      1680
     atggatcaaa agggcaaata ctcaatatct accaaaaatg ttaatgcatg tactctttgc      1740
     ccagtaatca accccacatc tagaaatgta ttctataaaa ttctagcaca agtgtgtaaa      1800
     gaaatatggc aagagtgttt ctggcagcac attttctaat aataaaatat ttgaaagaaa      1860
     aaaaaaaaaa aaaaaaaaaa aaaaaaaa                                         1888
//