EBI Dbfetch

ID   BC149064; SV 1; linear; mRNA; STD; MAM; 1617 BP.
XX
AC   BC149064;
XX
DT   12-JUL-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
XX
DE   Bos taurus mannosyl (alpha-1,6-)-glycoprotein
DE   beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B, mRNA (cDNA clone
DE   MGC:151539 IMAGE:8211011), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1617
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000005104; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000006729; Bos_taurus.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series:  Plate:  Row:  Column: 0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1617
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-25"
FT                   /clone="MGC:151539 IMAGE:8211011"
FT                   /tissue_type="Hippocampus, female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1617
FT                   /gene="MGAT5B"
FT   CDS             40..987
FT                   /codon_start=1
FT                   /gene="MGAT5B"
FT                   /product="MGAT5B protein"
FT                   /db_xref="UniProtKB/TrEMBL:A6QNY6"
FT                   /protein_id="AAI49065.1"
FT                   /translation="MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFSLCFLMTSLGGQF
FT                   SARRPGDSPFTIRTEVMGGPESRGVLRKMSDLLELMVKRMDTLARLENSSELHRAAGEG
FT                   RFALDRLPAGPGLMERIQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCDAPSDP
FT                   KFPDCSGKVEWMRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTATRRA
FT                   PKPLPKVQAVFRSNLSHLLELMGSGKESLIFMKKRTKRFTAQWALAAQRLAQKLGGVRR
FT                   DQKQSPCHFMSYLLSVFTVVCLFHLDHKRLQGRM"
XX
SQ   Sequence 1617 BP; 332 A; 471 C; 459 G; 355 T; 0 other;
     ggcctcgccc tcggcttcta gcccggacaa gtttgaacaa tgatcacagt caaccccgat        60
     gggaagataa tggtcagaag atgcctggtc accctgagac cctttcggct ttttgtcctg       120
     ggcattggct tcttctctct ctgcttcctg atgacgtctc tgggaggcca gttttcggcc       180
     cggcgcccgg gggactcgcc cttcaccatc cgcacagaag tgatgggtgg gccggagtcc       240
     cgtggtgtcc tccgcaagat gagtgacctg ctggagctga tggtgaagcg catggacacg       300
     ctggccaggc tggagaacag cagtgagctg caccgggctg ccggcgaggg gcgttttgcc       360
     ctggacaggc tccctgccgg gcctggcctc atggagcgga tccaggccat cgcccagaac       420
     gtctcggaca ttgctgtgaa ggtggaccag atcctgcgcc acagcctgct cctgcacagc       480
     aaggtgtctg aaggccggcg ggaccagtgt gacgcaccta gtgaccccaa gttccctgac       540
     tgctcaggga aggtggagtg gatgcgcgcc cgctggacct ctgacccttg ctacgccttc       600
     ttcggggtgg acgggaccga gtgctccttc ctcatctacc tcagtgaggt cgagtggttc       660
     tgccccccgc tgccctggag gaaccagacg gccacccgga gggctcccaa gcccctcccc       720
     aaggtccagg cagttttccg gagcaatctg tcccacctcc tggagctgat gggcagcggg       780
     aaggaatcgc taatcttcat gaagaaacgc accaagcggt tcacagccca gtgggcactg       840
     gccgcccagc gcctggcgca gaaactgggg ggcgtccgga gggaccagaa gcagagtcct       900
     tgtcatttca tgagttacct cttgtctgtg tttactgttg tctgcctctt tcatctggac       960
     cataagcgcc ttcagggcag gatgtgaccg tcctgttcac ctgtgtctcc agcgaggtca      1020
     ccctgcctct tggtccctcc gctgtgctct ggtgccagaa agcacagccg ggagggagac      1080
     tgtgccttcc gctggccggg tgtccctggg ggtggccggg ccgggggctg ctgctcctcc      1140
     aagctgaccc tctgtgtccc cccacccccg accccaccag atcctcgtcc acatcggctt      1200
     cctgaccgag gagtctgggg acgtgttcag cccgcgggtg ctgaagggcg ggcctctggg      1260
     ggagatggtg cagtgggcag acatcctggc tgctctctat gtcctgggcc acggcctccg      1320
     gatcacagtg tccctgaagg agctgcagag ctgcagaatg aggatattac caggactctt      1380
     gtgttcacct gggagtttct ctcacctatc cctctgccct cgaccccacc cagccctgga      1440
     ggaaacctgg aacttggatt ttgtgtttat cattcttttg ctttaaaaaa taaatttgtt      1500
     cttttgttgt tgttttacaa attcatgtat caataaacaa tatatgattt agttttttaa      1560
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa         1617
//