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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC148870; SV 1; linear; mRNA; STD; MAM; 1735 BP.
XX
AC   BC148870;
XX
DT   12-JUL-2007 (Rel. 92, Created)
DT   16-OCT-2008 (Rel. 97, Last updated, Version 4)
XX
DE   Bos taurus galactose-3-O-sulfotransferase 1, mRNA (cDNA clone MGC:140153
DE   IMAGE:8166201), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1735
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (10-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000014232; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000018912; Bos_taurus.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 265 Row: h Column: 7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1735
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-11"
FT                   /clone="MGC:140153 IMAGE:8166201"
FT                   /tissue_type="Hypothalamus, 8.5 month female Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1735
FT                   /gene="GAL3ST1"
FT   CDS             78..1349
FT                   /codon_start=1
FT                   /gene="GAL3ST1"
FT                   /product="GAL3ST1 protein"
FT                   /db_xref="GOA:A6QNK1"
FT                   /db_xref="InterPro:IPR009729"
FT                   /db_xref="UniProtKB/Swiss-Prot:A6QNK1"
FT                   /protein_id="AAI48871.1"
FT                   /translation="MPLPQKKRWESMAKGLVLGALFTSFLLLLYSYAVPPLYTGLASTT
FT                   PEGAAPCSPAPREPEAPTSANGSAGGCQPRRDIVFMKTHKTASSTLLNILFRFGQKHGL
FT                   KFAFPNGRNDFDYPAFFARSLVQDYRPGACFNIICNHMRFHYDEVRGLVAPNATFITVL
FT                   RDPARLFESSFHYFGSVVPFTWKLSGRDKLAEFLQDPDRYYDARGYNAHYLRNLLFFDL
FT                   GYDSDLDPSSPQVQEHILEVERHFHLVLLQEYFDESLVLLKDLLCWELEDVLYFKLNAR
FT                   RASAVPRLSGELYRRATAWNVLDARLYRHFNASFWRKVEAFGRERMAREVAALRRANER
FT                   MRRICIDGGRAVDAAAIEDSAMQPWQPLGAKSILGYNLKKSIGQRHAQLCRRMLTPEIQ
FT                   YLMDLGANLWITKLWKFIRDFLRW"
XX
SQ   Sequence 1735 BP; 372 A; 579 C; 496 G; 288 T; 0 other;
     agtaagcgcc cgggcggcgc ggcccgtggc cgaaactgca cgccaagccc gagaaggacc        60
     gggacaaggt gtctgagatg ccgctgccac agaagaagcg ctgggagtcc atggccaagg       120
     ggctggtgct gggagcgctc ttcaccagct tcctgctact gctgtactcc tatgctgtcc       180
     ccccactgta cactggcctg gcttccacga cccccgaggg cgcggcaccc tgctctccgg       240
     ccccgaggga gccagaggct cccacctcgg ccaacggctc ggcgggaggc tgccagccgc       300
     ggcgggacat cgtgttcatg aagacgcaca agacggccag cagcacgctg ctcaacatcc       360
     tgttccgctt cggccagaag cacgggctca agttcgcctt ccccaacggc cgcaacgact       420
     tcgactaccc cgccttcttc gcgcgcagcc tggtgcagga ctaccggccc ggggcctgct       480
     tcaacatcat ctgcaaccac atgcgcttcc actacgacga ggtgcggggc ctggtggcgc       540
     ccaacgccac cttcatcacc gtgctgcgcg accccgcccg cctcttcgag tcctccttcc       600
     actacttcgg ctccgtggtg cccttcacgt ggaagctctc gggccgcgac aagctggccg       660
     agttcctgca ggaccccgac cgctactacg acgcccgcgg ctacaacgcc cactacctcc       720
     gcaacctgct cttcttcgac ctgggctacg acagcgacct ggaccccagc agcccgcagg       780
     tgcaggagca catcctggag gtggagcgcc acttccacct ggtgctgctg caggagtact       840
     tcgacgagtc gctcgtgctg ctcaaggacc tgctgtgctg ggagctggag gacgtgctct       900
     acttcaagct caacgcccgc cgcgcctcgg ccgtgccgcg cctctcgggc gagctgtacc       960
     ggcgcgccac ggcctggaac gtgctggacg cgcgcctcta ccgccacttc aacgccagct      1020
     tctggcgcaa ggtggaggcc ttcgggcgcg agcgcatggc ccgcgaggtg gccgccctgc      1080
     ggcgcgccaa cgagcgcatg cgccgcatct gcatcgacgg cggccgcgcg gtggacgcgg      1140
     cggccatcga ggactcggcc atgcagccct ggcagccgct gggcgccaag tccatcctgg      1200
     gctacaacct caagaagagc atcgggcagc ggcatgcgca gctctgccgg cgcatgctca      1260
     cgccggagat ccagtacctg atggacctgg gcgccaacct gtggatcacc aagctctgga      1320
     agttcatccg ggacttcctg cggtggtgac gccggggccc ccgccgagga gggcccggcg      1380
     ggggtcccgc cagccacccc cctgcggccc ctcttggtgc caccccagtt cctggggtga      1440
     ggtggggctg ttctgagggg tgcaaccagc caaggactgg gcccacggcc acagggccta      1500
     actgagatca gtatttgact aattagagtt gttttttttt tttaattaaa tccccctacc      1560
     ctccacccaa aaagaatgtt ctattttctg gctcccctta aaggggagac ttcagaatta      1620
     aaagaatttg atgtgttttt gttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1680
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa           1735
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