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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC148128; SV 1; linear; mRNA; STD; MAM; 1172 BP.
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AC   BC148128;
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DT   12-JUL-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Bos taurus glutathione peroxidase 7, mRNA (cDNA clone MGC:148886
DE   IMAGE:8259409), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-1172
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (26-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000018281; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000024329; Bos_taurus.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: S. Lobo, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 292 Row: e Column: 22.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1172
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-22"
FT                   /clone="MGC:148886 IMAGE:8259409"
FT                   /tissue_type="Fetal cerebellum, Hereford, 6 month male
FT                   fetus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1172
FT                   /gene="GPX7"
FT   CDS             11..571
FT                   /codon_start=1
FT                   /gene="GPX7"
FT                   /product="GPX7 protein"
FT                   /db_xref="GOA:A6QLY2"
FT                   /db_xref="InterPro:IPR000889"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="InterPro:IPR012336"
FT                   /db_xref="InterPro:IPR013376"
FT                   /db_xref="UniProtKB/Swiss-Prot:A6QLY2"
FT                   /protein_id="AAI48129.1"
FT                   /translation="MVAARAAAWLLLAAAACAPREQDFYDFKAVNIRGKLVSLEKYRGS
FT                   VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFAR
FT                   RTYSVSFPMFSKIAVTGTGAHPAFKYLTETSGKEPTWNFWKYLVAPDGKVIGAWDPTVS
FT                   VEEIRPQITALVRKLILKKREDL"
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SQ   Sequence 1172 BP; 321 A; 299 C; 289 G; 263 T; 0 other;
     ggagcgagtc atggtggcgg cacgggcggc ggcgtggctg ctcctggctg cggcggcctg        60
     cgcgccgcgg gagcaggact tctacgactt caaggccgtc aacatccggg gcaagttggt       120
     gtcgctggag aagtaccgag gctcggtgtc cctggtggtg aacgtggcta gcgagtgtgg       180
     cttcacagac cagcactatc gggccctgca gcagctgcag cgggacctgg ggccccacca       240
     cttcaatgtg cttgccttcc cctgcaacca gtttggccag caggagcccg acagcaacaa       300
     ggagatcgag agctttgccc gccgcacata cagtgtctct ttccccatgt ttagcaagat       360
     tgcagtcacc ggcactggtg cccaccctgc cttcaagtac ctgactgaga cttctgggaa       420
     ggagcctacc tggaacttct ggaagtacct ggtggcccca gatggaaagg tgataggagc       480
     ttgggaccca actgtgtcgg tggaggaaat caggccccag attacagcgc ttgtgaggaa       540
     actcatcctg aagaagcgag aagacttata accactttcc ctcctcaccc ccatcccctc       600
     ccctgaccgt gcatgagtga ccaaagcaga ctgaaatggt gctacaaagg gagagaccac       660
     tgactctcct ccactcttgt ccccccaccc catcactcct actgggggaa aattctaata       720
     gcttgattat ttgaatctta gagcaacctc taggaactcc tgaccagtga gagttcttga       780
     ccaatgactc accagccgat aagaacctct agcccgtgag aatgtgtggc aaatagaagc       840
     atttcaagca ataatctcct acctataaag cagggccaat tcctacctca cagggctgtt       900
     gtgaggatga ggaagaaaag cctatgaaag tgccaagggc agtgccagct aaccaggagg       960
     cattcaataa atggtttttg catatgtacc aaaaaataag ttgtgatcaa taaaaacttg      1020
     aactcaacat gaatttagag ccatgagaat ccaggccaaa catttgtagc tgttactgtt      1080
     ttcatgtgtt tttttttttt ttttaattac aaaagtaata caattcattg taaaataata      1140
     caagatgata caaaataaaa aaaaaaaaaa aa                                    1172
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