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EBI DbfetchID BC147929; SV 1; linear; mRNA; STD; MAM; 3816 BP. XX AC BC147929; XX DT 12-JUL-2007 (Rel. 92, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Bos taurus UDP-N-acetyl-alpha-D-galactosamine:polypeptide DE N-acetylgalactosaminyltransferase-like 1, mRNA (cDNA clone MGC:159781 DE IMAGE:8563434), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3816 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (26-JUN-2007) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000009998; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000013186; Bos_taurus. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 302 Row: m Column: 15. XX FH Key Location/Qualifiers FH FT source 1..3816 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-17" FT /clone="MGC:159781 IMAGE:8563434" FT /tissue_type="Ascending colon, 6 month male fetus, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..3816 FT /gene="GALNTL1" FT CDS 131..1804 FT /codon_start=1 FT /gene="GALNTL1" FT /product="GALNTL1 protein" FT /db_xref="GOA:A6QLD9" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:A6QLD9" FT /protein_id="AAI47930.1" FT /translation="MRKIRANAIAILTVAWILGTFYYLWQDNRAHAASSGGRGAKRAGG FT RPDQLREDRTIPLIVTGTPSRGFDEKAYLAAKQLKPGEDPYRQHAFNQLESDKLSPDRP FT IRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPASLIQEIILVDD FT FSSDPEDCLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAAAVLTFLDSHCEVNTEWLQ FT PMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPLEQKIART FT DPTKPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPC FT SRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEFKQYYYEARPSAIGKAFGSVAT FT RIEQRKKMNCKSFRWYLDNVYPELTVPVKEVLPGIIKQGTNCLESQGQDTAGNFQLGMG FT ICRGSAKNPPAAQAWLFTDHLIQQQGKCLAATSTSVSPGSLVVLQACNPREGRQRWRRK FT ASFIQHSVSGLCLEAKPAQLVTSKCQADIPAQQWQLLPHT" XX SQ Sequence 3816 BP; 776 A; 1168 C; 1111 G; 761 T; 0 other; ctttttctgc tctgcaggac cgagcagccc cgcgcgagcg aaaacaaaca gctggggctg 60 agagtgcccc cgccccggcc ccgagagcac gccagcccgg gcccctactc cgggcgtccg 120 cccgcccacc atgaggaaga tccgcgccaa tgccatcgcc attctgaccg tagcctggat 180 cctgggcact ttctactact tatggcagga caaccgagcc cacgcagcat cctccggcgg 240 ccggggcgca aagagggcgg gcgggaggcc agaccagctc cgagaggacc gcaccatccc 300 gctcattgtg acaggaacac cctccagagg ctttgatgag aaggcgtacc tggcagccaa 360 gcagctgaag cctggagagg acccctacag gcagcatgcc ttcaaccagc tggagagcga 420 caagctgagc cctgaccggc ccatccggga cacccgccat tacagttgtc catccgtgtc 480 ctactcctcg gacctgccgg ccaccagcgt catcatcacc ttccacaacg aagcccgctc 540 tacgctcctg cgcacagtga agagcgtcct gaaccgaact cctgccagcc tgatccagga 600 gatcattcta gtggatgact tcagttcaga tcccgaagac tgtctgctgc taaccaggat 660 ccccaaggtc aagtgcctac gcaatgaccg gcgggaaggg ctgatccgct cccgagttcg 720 tggggcagac gtggcggcag ctgccgtcct cacttttctg gacagccact gcgaagtgaa 780 cacggagtgg ctgcagccca tgctgcagcg ggtcaaggag gaccacaccc gcgtggtgag 840 ccccatcatt gatgtcatca gtctagataa tttcgcttac cttgctgcat ctgctgatct 900 tcgtggagga ttcgactgga gcctgcattt caagtgggag cagatccctc tggagcagaa 960 gattgctcgg acagacccca ccaagcccat aaggacgcct gtcattgctg gaggaatctt 1020 cgtgattgac aagtcctggt ttaaccactt gggaaagtat gatgctcaga tggacatctg 1080 ggggggagaa aattttgagc tgtccttccg ggtgtggatg tgcggcggga gcttagagat 1140 cgtgccctgc agccgggtgg gccacgtctt caggaaacgg cacccgtaca acttccccga 1200 gggcaatgcc ctcacctaca tcaggaatac caagcgtacc gcagaggtgt ggatggatga 1260 gttcaagcag tattactatg aggcgcggcc gtcggccatc gggaaggcct tcggcagcgt 1320 ggccacgcgg atcgagcaga ggaagaagat gaactgcaag tccttccgct ggtacctgga 1380 taacgtctac ccagagctca ctgtccccgt gaaggaagtg ctcccgggca tcattaagca 1440 ggggactaat tgtttagaat cccagggcca ggacacagct ggtaacttcc agctcggaat 1500 ggggatctgc agagggtctg ccaagaaccc cccagcggcc caggcgtggc tcttcactga 1560 ccatctcatc cagcagcagg ggaagtgcct cgctgccacc tccacctctg tctccccagg 1620 atccctggtc gtactgcagg cgtgcaaccc aagagaaggc aggcagagat ggaggagaaa 1680 agcctctttc atccagcatt cagtcagcgg cctctgcctg gaggccaagc ccgcccagct 1740 ggtgaccagc aagtgccagg ccgacatccc agcccagcag tggcagctgt tgccgcacac 1800 atgaccgtag cccccggcct cctgtacctt ttgcatgaga ctttgggacc ggaagggggt 1860 tggggtgggg gagtataaag cgggccgtct ccatctcgtc acatttctgc cggaatcatc 1920 agccaacacc gctgccacga cacacgatgc tgcaaagctt ggacggggag gacgcagggg 1980 gaatgccctg cttgctgtcc tggccaccac ctggccttgc ctggggataa ctggactgcg 2040 actgggcagc ctggcccttt gttactgccc ttcaccctcc caaggcctgg acagtggttt 2100 ggggcctctc ctcgtgggct ggggaaaagg aggactgcat ttcccctgag tcttgctggg 2160 ccccgggggc ctgcctgtgg ggtcgggcac aagaggagag cgtgggcagc cgtgaacagg 2220 aggcaggcgg aaggcagagg gaggggcagc ctgtgggtag gtggggaaca ggaagaagtg 2280 agccgctcag gggtctgtcc caggcaggcg ctgggttggg tgcgggaggg atgggagcca 2340 gggccaagga tgggtgagct gcagaaagat gggaacagaa aagctgcaaa gcatggaaaa 2400 gaattggtct cgcccggggg cctagttcct cccagggccc agtgcctcca gtcccgcgct 2460 ctgcttccca cgttctcagc agggcgctgc aggagcacct ccaggggcag cctcgggacc 2520 cagtttatta aacggatccc acttctgttt ggatatgtgt caagaccaga cctctccctt 2580 gggccttaaa gaccagcggg ttcccggagc ccctgcctgg gcgcaccggg tggaccccca 2640 taaggacagg caccactgag cagccccgtc cttcccgcta gtttttgact cctgccttct 2700 ctaaagccct tgcctctgta aatacagcat cattatgggg tcggggcgca gggcggtaag 2760 aacggggagc atcggtaaac catgaggact aagtcatcca ggctggactc cccactgcca 2820 gagggaggcc cttggggctc ggctactgca gcggccagca ggctggctgg cggccccagt 2880 ttgtacagag ttcccagttc cttctcacac ccactgggcc tctctccccc tcccccaggg 2940 cctggtcttg gaaccgcttc tgctattaat atttccaaca ttcctcttcc cccgccccac 3000 tggcttaggc caagtgatct taggcaaaag tctggtgata ccaggattcc tgcggggggc 3060 ggcggtgggg gttgtctcct acccaaagca aatcagcctg gaatgcctaa ggagttgata 3120 gattctgggg ggcccaggaa tctcctgaaa tggtccccca aatagtgcat gtgtgtgcat 3180 atatgcactg tcctggggag aggatccatg gactgtccca ggttcataca gaggcctctg 3240 gtctccggag ggtctggctt tttctggatt ggagctgccg cgcccctccc cttccctagt 3300 gtgcctcaac tgctttggcc ccgctccctc tgcacagcct tgggctgtgg tctgccacac 3360 ccaccctgga gggctctcag tggtttcctt tcacctcctg gctctccgca gtgctcctgg 3420 gcctcagcct gcaccccctg cgctcacagc gaggagccct tggcccccag agccacactt 3480 ttgccatcct ctgtgagatg tttatccatc gccatctccc ttgtgtgtgt gtctaccccg 3540 gcaggtagcg tgggcctttg ggacgggaat cttgggcctc tcttactgaa agtaagagga 3600 ctgccattca gcctttcaga gggccccttc cttccctgtg attggaccgg gctcagcacc 3660 tgtcagcctc ctttgggact cagccctgtt ctgtttttgc ttttcctctt cttgaccaaa 3720 gcatgtgcca ctcgctgtcc ctgaggacct tgtctttatg aaaaacacct ggaataaaac 3780 cacttctcac aaaaaaaaaa aaaaaaaaaa aaaaaa 3816 // |
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