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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC142105; SV 1; linear; mRNA; STD; MAM; 980 BP.
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AC   BC142105;
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DT   10-JUN-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Bos taurus holocytochrome c synthase, mRNA (cDNA clone MGC:152566
DE   IMAGE:8430452), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-980
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (07-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000012113; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000016072; Bos_taurus.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series:  Plate:  Row:  Column: 0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..980
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-13"
FT                   /clone="MGC:152566 IMAGE:8430452"
FT                   /tissue_type="Thymus, female, 8.5 months, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..980
FT                   /gene="HCCS"
FT   CDS             64..891
FT                   /codon_start=1
FT                   /gene="HCCS"
FT                   /product="HCCS protein"
FT                   /db_xref="GOA:A5PJG7"
FT                   /db_xref="InterPro:IPR000511"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5PJG7"
FT                   /protein_id="AAI42106.1"
FT                   /translation="MGLSASAPAASTVQTSTPAASDHQTAAPTSGCPMHEGKVKGCPVS
FT                   AEPSDSTCGSKTNSVPAHQERAYEYVQCPITGAKAANKENLDPSNLMPPPNQTPAPDQP
FT                   FPLSTVREESSIPRADSDKKWVYPSEQMFWNAMLRKGWKWKDEDISQKDMYNIIRIHNQ
FT                   NNEQAWKEILKWEALHAAECPCGPSLIRFGGKAKEYSPRARIRSWMGYELPFDRHDWII
FT                   NRCGTEVRYVIDYYDGGEVNQDYQFTILDVRPALDSLSAVWDRMKVAWWRWTS"
XX
SQ   Sequence 980 BP; 263 A; 239 C; 265 G; 213 T; 0 other;
     ggcgggaccg gcagccgggt acaggagtca gaattgcttg gattcaacac tgggagtccc        60
     accatgggct tgtctgcatc tgcccctgct gcttctacag ttcagacctc tacccctgca       120
     gcttcagatc atcagacagc agccccaacg tctggatgcc caatgcacga agggaaagtg       180
     aaaggctgtc cagtgagtgc cgagccgtcg gactcaacct gtgggagcaa aacgaactct       240
     gtgcctgcgc accaggagcg cgcctacgag tacgtgcagt gtcccatcac cggcgccaag       300
     gccgcgaata aggagaacct ggatccttct aacctgatgc cacctcctaa tcagacacca       360
     gcccccgacc agccgtttcc actatctact gtgagagagg aatcgtctat tccgagggca       420
     gattcagata aaaagtgggt ttatccttct gaacagatgt tctggaatgc gatgttaaga       480
     aaagggtgga aatggaagga tgaggatatt agtcagaaag acatgtataa tatcattagg       540
     attcacaacc agaataatga gcaagcttgg aaggagattt tgaaatggga agcccttcac       600
     gctgctgagt gtccttgtgg tccatccctg atccggtttg gaggcaaagc aaaagagtat       660
     tcgccacggg caagaattcg ctcctggatg gggtacgagc tgcctttcga caggcacgac       720
     tggatcatca accgttgcgg gacggaagtg agatatgtca ttgactacta cgacgggggt       780
     gaggtcaacc aagactacca gttcaccatc ctggacgtgc ggcccgcgtt ggattcgctg       840
     tcggccgtat gggaccggat gaaggtggcc tggtggcgct ggacttccta agcaccgctt       900
     tgtcagagat gagaaaatag aaacgatttt ttttttctga gaagtacatt aaactatttt       960
     ccccaaaaaa aaaaaaaaaa                                                   980
//
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