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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC142048; SV 1; linear; mRNA; STD; MAM; 1108 BP.
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AC   BC142048;
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DT   10-JUN-2007 (Rel. 92, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Bos taurus ubiquitin-conjugating enzyme E2L 6, mRNA (cDNA clone MGC:152289
DE   IMAGE:7956792), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-1108
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (07-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000012989; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000017267; Bos_taurus.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, L. Guan and S. Moore,
CC   University of Alberta
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series:  Plate:  Row:  Column: 0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1108
FT                   /organism="Bos taurus"
FT                   /lab_host="XL10-Gold"
FT                   /strain="Crossbred x Angus"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-02"
FT                   /clone="MGC:152289 IMAGE:7956792"
FT                   /tissue_type="Ileum, crossbred X Angus female calf, 6
FT                   months old."
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1108
FT                   /gene="UBE2L6"
FT   CDS             41..502
FT                   /codon_start=1
FT                   /gene="UBE2L6"
FT                   /product="UBE2L6 protein"
FT                   /db_xref="GOA:A5PJC4"
FT                   /db_xref="InterPro:IPR000608"
FT                   /db_xref="UniProtKB/Swiss-Prot:A5PJC4"
FT                   /protein_id="AAI42049.1"
FT                   /translation="MTASKRVAKELEDLQKELPKYLRNLCSEEDNVLVWHALLLPERPP
FT                   YNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQV
FT                   LEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQFGVDRPS"
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SQ   Sequence 1108 BP; 289 A; 307 C; 303 G; 209 T; 0 other;
     ggtctggcga gtcccccgga gccccgctct cggttctaag atgacggcga gcaagcgggt        60
     ggcgaaggag ctggaagacc tgcagaagga gcttcccaag tacctgcgga acctgtgcag       120
     cgaggaggac aacgtgctgg tgtggcatgc gctcctgctg cctgagaggc caccctacaa       180
     cctcaaggcc ttcaggctgt gcatcagctt ccccagggag tacccgttcc agcccccgac       240
     ggtgaaattc accactagga tctaccaccc caacgtggac agggacggga gggtgtgcct       300
     gcccatcatc agcaagaaga actggaaagc cagcaccagg acctgccaag tcttggaggc       360
     cctcaacatg ctggtgaatc aaccggagcc gggacagccc gttcggctgg agctcgcgga       420
     gcagctgaca caggacccag agctgtttga ccagatggcc caagagttca ccctccagtt       480
     tggagtggac cggccctcct aacccagctt ctgagccgcc tgctttctgt gtgacggatg       540
     gacgcccctc gtggatgggg gaccagagcc tctttgcgat tttgcacttg ctcatgtctt       600
     ccaagatttc cttcttaggt tgcgtgtgtg tgtacgggga ggggactgcc attatgagtg       660
     tggacccact ggccacagat gtgctttccc cagccccttt ctctgccccg gagccagagg       720
     catttacgtt tgcagactca aaatccagct ctccagtgct ccgtgatggg ggttcctggt       780
     cccaccggtt ggtccatctt agagactcag gccaccttcc cggccagatg agcagccaac       840
     ccgaatcccc accccccaca gagccctgct tggggggcag cagataggag ggggccgggg       900
     gaggagggac tcttaccact aagtactctg gggatggagt ggttgaatcg tagacttgta       960
     tagatttagg tgcaaaacct ttccgtttcc actgatgaat cataaagtga agaatctcct      1020
     ctccacccca gaaaaaaaaa agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1080
     aaaaaaaaaa agaaaaaaaa aaaaaaaa                                         1108
//
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