EBI Dbfetch

ID   BC140500; SV 1; linear; mRNA; STD; MAM; 2275 BP.
XX
AC   BC140500;
XX
DT   03-MAY-2007 (Rel. 91, Created)
DT   28-JUN-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Bos taurus protein O-fucosyltransferase 2, mRNA (cDNA clone MGC:139158
DE   IMAGE:8099243), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-2275
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (30-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000007818; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000010281; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000057179; Bos_taurus.
DR   ImaGenes; IMAGp998N0917419Q.
DR   ImaGenes; IRAKp961M22267Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 267 Row: m Column: 22.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2275
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-17"
FT                   /clone="MGC:139158 IMAGE:8099243"
FT                   /tissue_type="Ascending colon, 6 month male fetus, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..2275
FT                   /gene="POFUT2"
FT                   /note="synonym: FUT13"
FT   CDS             8..1297
FT                   /codon_start=1
FT                   /gene="POFUT2"
FT                   /product="POFUT2 protein"
FT                   /db_xref="InterPro:IPR019378"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YRR5"
FT                   /protein_id="AAI40501.1"
FT                   /translation="MAALAVVFLLLWAASWPSASAFGEEFWPGQSAADILSGAASRRRY
FT                   LLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPW
FT                   SDFFDLPSLNRNIPVIEYEQFIAESGGPFIDQVYILQGYTEGWKEGAWEEKIDSRPCIE
FT                   PPLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIIAPVLLRNTSARSVMLDRAEN
FT                   LLHDHYGGKEYWDTRRSMVFARHLRAVGDEFRSRYLNSTDVADGIPFEEDWTRMKVKLG
FT                   SSLGGPYLGVHLRRKDFIWGHREDVPSLDGAVRKIRSLMKAHQLDKVFVATDAVRKELE
FT                   ELRRLLPEMVRFEPTWEELELYKDGGVAIVDQWICAHARFFIGTSVSTFSFRIHEEREI
FT                   LGLDPKTTYNRFCGDKEKACEQPTHWRIAY"
XX
SQ   Sequence 2275 BP; 472 A; 640 C; 709 G; 454 T; 0 other;
     cggggccatg gcggcgcttg ccgtcgtctt cctgctgctc tgggcggcat cctggccgtc        60
     ggcctcggcc ttcggcgaag agttctggcc tggccagtcg gcagccgaca tcctgtcggg       120
     ggcggcgtcc cgcagacggt accttctgta cgatgtcaat ccccccgagg gtttcaacct       180
     ccgcagagat gtctacatcc gcatcgcctc cctcctgaag actctgctga agacggagga       240
     gtgggtgctg gtgctgcccc cctggggccg cctctaccac tggcagagcc ctgacattca       300
     ccaggtccgg attccctggt ctgacttctt tgaccttcca agtctcaaca gaaacatccc       360
     tgtcattgag tacgagcagt tcatcgcaga gtctggcggg cccttcatcg accaggtcta       420
     catcctgcaa ggctacacgg aaggctggaa ggagggggcc tgggaagaga agattgacag       480
     ccggccctgc atcgagccac cgctgtactc tcaggacaag cacgagtatt acagaggatg       540
     gttttggggt tacgaagaga cgaggggttt aaacgtttcc tgtctgtctg tccagggatc       600
     ggcctccatc atcgcgcctg tactattgag aaacacgtct gcacggtctg tgatgttgga       660
     ccgagccgag aacctcctcc atgaccacta cggcgggaag gagtattggg acacccggcg       720
     cagcatggtg ttcgccaggc acctgcgggc agtaggggac gagttcagga gcaggtacct       780
     caactccacg gacgtggccg atggaattcc ctttgaggag gactggaccc ggatgaaggt       840
     caagctgggc tcctcgctgg ggggcccata cctgggcgtc cacctgagga ggaaagactt       900
     catctggggg cacagggagg atgtgcccag cctggacggg gccgtgcgga agatccgcag       960
     cctcatgaag gcccaccagc tggacaaggt gttcgtggcc acagatgctg tcaggaagga      1020
     gctggaggag ttgcggaggc tgctgcctga gatggtgcgg ttcgaaccca cgtgggagga      1080
     gctggagctc tacaaggatg ggggcgtggc catcgtggac cagtggatct gtgcgcacgc      1140
     ccggtttttt atcggcacat cagtctccac gttctccttt cgaattcacg aggagaggga      1200
     gatcctgggc ttggacccca agacaacata caaccggttc tgcggggaca aggagaaggc      1260
     gtgtgagcag cccactcatt ggaggattgc atactgagcc cacacggctg cccgaggaca      1320
     cgtgtcccct cccggacctc aggctgtgga ccccgcggag cggtgctgtg caccgcctca      1380
     gcccggttgt ctgtctctca gctggcacct ctgcatcccc aggacttggg ttgctttcac      1440
     ttgggatcca tctggaagcg cgcgtctgca gccagcgagg cccccggtga tgccgcggag      1500
     gttctgactt gtccctactg accttggtct gcggggtttc cagcagtgtt ggcaagcgtg      1560
     gtacctgggc tgctccagcc ctgggccagt ggacgcaatg ctgactctgt ctgtgcccca      1620
     gagcagtgcc cttggccctg cccttctccc cacagaactc catgccagct ggatggcagg      1680
     cggaccccac ctcaccgggg ctgggctgag tcttgctggg ggctgtgatc cccacccctc      1740
     gccttggcct gaatcagagc tccagaatgt tcctcaggag ggcccagtgc tctgtgccca      1800
     tattggggtg ggggtggggg gaagtccttc cgggatggtc tgcagggtct gtccaggtgg      1860
     tgtggtctaa tggccccagc aacgtggtgg gcaaccagat gctcgtcctt gaagcctctg      1920
     tgcccccgcc cctccggcct tgtgggcaaa gggagcagct gagaggagca gggtcagtcc      1980
     agcctcagac cgggtgccca gcttcgccaa cacctggggt gaccgctgac gtgggtgtgg      2040
     ggagccaggc agagtttggg ggtgggatag agccctgacc tcctgcgtct ccttcagggt      2100
     cctgggtggt gttctcggcc gtgcagggtg gaacgacaag atatttattc tttctccatt      2160
     tgtacatcaa atgttaataa aaatacattt tctaaaagcg aaaaaaaaaa aaaaaaaaaa      2220
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa           2275
//