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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC137365; SV 1; linear; mRNA; STD; HUM; 1808 BP.
XX
AC   BC137365;
XX
DT   13-MAY-2008 (Rel. 95, Created)
DT   13-MAY-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Homo sapiens forkhead box D4-like 6, mRNA (cDNA clone MGC:168986
DE   IMAGE:9021363), complete cds.
XX
KW   MGC.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1808
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1808
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (29-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
XX
DR   Ensembl-Gn; ENSG00000204793; Homo_sapiens.
DR   Ensembl-Tr; ENST00000377473; Homo_sapiens.
DR   Ensembl-Tr; ENST00000437343; Homo_sapiens.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Mike Brownstein, NIMH
CC   cDNA Library Preparation: British Columbia Cancer Research Center
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: LLDM Plate: 672 Row: p Column: 1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1808
FT                   /organism="Homo sapiens"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_362"
FT                   /clone="MGC:168986 IMAGE:9021363"
FT                   /tissue_type="Pooled, cerebellum, kidney, placenta, testis,
FT                   lung, colon, liver, heart, thyroid, bladder, uterus, PCR
FT                   rescued clones"
FT                   /note="Vector: pCR4-TOPO with reversed insert; Clone
FT                   identification sequence tag: CCCCGTGA"
FT                   /db_xref="taxon:9606"
FT   gene            1..1808
FT                   /gene="FOXD4L6"
FT   CDS             81..1334
FT                   /codon_start=1
FT                   /gene="FOXD4L6"
FT                   /product="forkhead box D4-like 6"
FT                   /db_xref="GOA:Q3SYB3"
FT                   /db_xref="HGNC:31986"
FT                   /db_xref="HSSP:2C6Y"
FT                   /db_xref="InterPro:IPR001766"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="InterPro:IPR018122"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q3SYB3"
FT                   /protein_id="AAI37366.1"
FT                   /translation="MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEA
FT                   ASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDAR
FT                   QPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLN
FT                   DCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLP
FT                   AAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGA
FT                   PKKAEGAALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQG
FT                   LRRVCPRPRGATATCSSDHQACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAA
FT                   LPPRARCWAGTCRPRRPC"
XX
SQ   Sequence 1808 BP; 349 A; 627 C; 515 G; 317 T; 0 other;
     atcccaggct tccagctcag cccgccccag gccaggtgat cggccgccac atcccctgcg        60
     actgaagcac ctgctcctcc atgaacctgc caagagctga gcgccttcgc tccacaccgc       120
     agcgcagcct ccgggactcc gatggggaag acggtaaaat cgatgtcctg ggagaggagg       180
     aagatgaaga cgaggtggaa gacgaggagg aggcggcgag ccagcagttc ctagagcagt       240
     cgctccagcc ggggctgcag gtggcccggt ggggcggggt tgcgcttccc cgagagcaca       300
     tcgagggcgg cggcggcccg agcgacccct cagagtttgg caccaagttc agggcaccgc       360
     caaggtctgc ggcggcctct gaagatgccc ggcagccggc aaagcccccc tactcgtaca       420
     tcgcgctcat caccatggcc atcctgcaaa acccgcacaa gcgcctcacg ctcagcggca       480
     tctgcgcctt cattagtggc cgcttcccct actaccgccg caagttcccc gcctggcaga       540
     acagcatccg ccacaacctc tcgctgaacg actgcttcgt taagatcccc cgcgagccgg       600
     gccacccagg caagggcaac tactggagcc tggaccccgc ctcccaagac atgttcgaca       660
     atggcagctt tctccggcgt aggaagcgtt tcaagcgcca ccaactgacc ccgggagccc       720
     acctgcccca ccccttccct ctacctgctg cacacgccgc cctgcacaac ccccacccag       780
     gccctctgct tggggcccct gccccgccgc agccagtccc gggggcctac cccaacaccg       840
     cccccgggag acgcccttac gctctgctgc acccgcatcc tcttcgctac ctactgctct       900
     cggcccccgt ctatgccggg gcaccgaaga aagcagaagg cgcggccctg gcgaccccgg       960
     cacccttccc gtgctgcagc cctcacttgg tcctcagcct tgggaggagg gcaagggtct      1020
     ggcgtcgcca ccgggaggcg gatgcatctc tttcagcatt gagagtatta tgcaaggggt      1080
     caggggagcg ggtacagggg ctgcgcagag tttgtccccg accgcgtgga gctactgcca      1140
     cctgctccag cgaccatcaa gcctgttgca tccccagacc gctgcccctt tgctgcaagt      1200
     gtccgccgcc gccgctgctc ggacaatttt gcagcaatag cagcagcatc aggaggagga      1260
     ctgcgccaac ggctgcgctc ccaccaaggg cgcggtgctg ggcgggcacc tgtcggcctc      1320
     gtcggccctg ctgaggtatc aggcagtggc agagggctct aggctgacat cgctggctgc      1380
     ccctttgggc ggagagggga cctcaccagt ttttttagta tcgcccacgc ccagttccct      1440
     ggccaactcc gcagggccct cctagagcca ggtgggagtg gggagcgacc cgcagctgct      1500
     cacttcacct tgcgcggccc attcagggcg tgtgcatctg aatcccgctg gagagcaaac      1560
     acgaacttct gttcgctgca aaatggttag aaagaaacag ctggattacg ttcctctaaa      1620
     aaccacctga acgtaacctt cgcagggcgt caagtcatct tttcttgcct tcggttgtgg      1680
     cttctatggc tgtcccgatt tgcgcatttc ctggggtact atgaacgtga gtggggtatt      1740
     ttgttctggc attaaaagaa aaacaagcaa gcaaacaaaa acacagcctc cgatgccaaa      1800
     catgttcc                                                               1808
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