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EBI DbfetchID BC136204; SV 1; linear; mRNA; STD; VRT; 2974 BP. XX AC BC136204; XX DT 24-MAR-2007 (Rel. 91, Created) DT 11-SEP-2007 (Rel. 93, Last updated, Version 2) XX DE Xenopus tropicalis hypothetical protein LOC100125087, mRNA (cDNA clone DE MGC:122763 IMAGE:7661757), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2974 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2974 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2974 RA Klein S., Gerhard D.S.; RT ; RL Submitted (20-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998M1916925Q. DR ImaGenes; IRAKp961D19246Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Timothy Grammer (Richard M. Harland Laboratory, CC University of California, Berkeley) CC cDNA Library Preparation: Joint Genome Institute CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 246 Row: d Column: 19 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 134025834. XX FH Key Location/Qualifiers FH FT source 1..2974 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="ElectroMAX DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropBrn3" FT /clone="MGC:122763 IMAGE:7661757" FT /tissue_type="Brain, adult" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8364" FT gene 1..2974 FT /gene="LOC100125087" FT CDS 385..2556 FT /codon_start=1 FT /gene="LOC100125087" FT /product="LOC100125087 protein" FT /db_xref="GOA:A4IIY7" FT /db_xref="InterPro:IPR002495" FT /db_xref="UniProtKB/TrEMBL:A4IIY7" FT /protein_id="AAI36205.1" FT /translation="MHLSCRSKAKFLALALLLLSAATWLYLSVGETEYGPSLGPVAPHF FT SATPSLQLELESRLRVAEEENRRLRQQLGEMRNEEQSTGVGTEGDNSSHCEHRSLTEKC FT ELIHVAIVCAGHNSSRDVVTLVKSILFHRRNPLHLHLITDAVALRVLGNLFKTWMVPSL FT QISFYNASELKPDVAWIPNKHYSGIYGLLKLTLTKALPSDLSKVIVLDTDITFATDIAE FT LWAIFKKFTGEQVLGLVENQSDWYLGNLWKNHKPWPALGRGFNTGVILLLLDKLRLIGW FT EEMWRLTAERELMNMLSTSLADQDIFNAVIKSSPTLVYQLPCYWNVQLSDHTRSEQCYS FT ELADLKVIHWNSPHKLRVKNKHVELFRTLYLTFLEYDGSLLRRELIGCPSEGEQQGGSQ FT AALSQLDEEDPCYDFRRESLASHRVHLSFLPHVTPPPDPYDVTLVAQLSMDRLQMLELI FT CRHWDGPMSLALYLSDAEAQQFLRYAQASEVLQSRTNVAYHVVYKEGQLYPVNLLRNVA FT LKNSQTPYVFLSDIDFLPMYGLYEYLRKSISQQDLTGPPKALIVPAFETLRYRLSFPKS FT KAELLSMLDTGALYTFRYHVWEKGHAPTDYAKWRTATTPYRVEWAPDFEPYVVVRRDCP FT EYDQRFLGFGWNKVSHIMELDAQEHELLVLPNAFIIHMPHAPSFDISKFRSSENYRLCV FT QALKEEFHQDLSRRYGSAALKYLTAERNR" XX SQ Sequence 2974 BP; 668 A; 843 C; 813 G; 650 T; 0 other; gtgggattta accagtgtta tggtggaacc agtgccccag gcagggggat acaggagccg 60 atcctccggc tggctggagt caaaatgtgg ggctgcctgg tgcctctgat gccggaatag 120 agtgagtttg gagcattaac cagcactaaa ccctccccca gcaatctgga gactgcccga 180 gagactgccc gggtctgaag ttacctgcaa ccgctggatg tgccctatat aaaccgccgc 240 tggatggaaa cttagcagac acttcgcctg cttctgggca ttgtggtgcc actttaaagc 300 ttataggatg ttgccggcag taataccaga ctttcccact tgacggcccc ccaacgacgc 360 agtccaggac agtgtggacc catcatgcac ctctcctgtc gcagcaaagc caagttcctg 420 gccctcgctt tactgctgct gtctgctgca acctggttgt acctgtctgt gggggagaca 480 gaatatggtc catccctggg gccggtagcc cctcattttt cggccacacc gtccctccag 540 ttagagctgg agagccgcct gcgggtagct gaggaggaga atcggagact gcgccagcaa 600 ctgggcgaga tgaggaatga ggagcaaagc accggagtag ggacggaagg ggacaacagc 660 agccattgtg agcacaggag cctgactgag aagtgtgaac tgatccacgt ggccatagtc 720 tgcgccggcc ataacagcag ccgagatgtg gtgaccctgg tgaagtccat tctgttccac 780 aggagaaacc ccttacatct gcacctgatc acggacgccg tggctctgcg cgtgctgggg 840 aacctgttca agacctggat ggtgccgtcc ctacaaatca gcttctataa cgcaagtgag 900 ctgaagccgg acgttgcgtg gatcccaaac aaacattact cggggatata tgggttactg 960 aagctcacac tgaccaaggc gctgccctcc gacctctcca aggtcatcgt cctggacacg 1020 gacatcacgt ttgccaccga cattgccgag ctctgggcaa tatttaagaa gttcacaggt 1080 gagcaagttc tgggtctggt ggagaatcag agtgactggt acctggggaa cctgtggaag 1140 aaccacaagc cgtggcctgc cttgggccga ggattcaaca caggggtcat tctgctgctg 1200 ttggacaagc tgcgcctgat tggctgggag gagatgtggc gactgacagc ggagagggag 1260 ttgatgaata tgctgagcac ctcgctggct gaccaggata tattcaatgc tgttatcaag 1320 agttccccta ctctagtcta tcagctgccc tgttactgga acgtgcagct ctccgaccac 1380 acgcgctccg agcagtgtta cagcgagctg gccgacctca aggtcattca ctggaactcc 1440 ccccacaagc tgcgagtcaa gaacaagcac gttgaactat tccgcaccct gtacctgact 1500 ttcctagagt acgacgggag cctcctgcgc cgagagctga ttggctgtcc gagtgaaggg 1560 gaacagcagg ggggcagcca ggctgctctg tcgcaattgg acgaggaaga tccgtgctat 1620 gatttccgga gggagagcct tgcatcccac cgcgtccacc tgtccttcct gccgcacgta 1680 accccgcccc cggaccccta tgatgtcacg ctggtggcac agctctctat ggacaggctg 1740 caaatgctgg agctgatctg ccggcactgg gacggcccaa tgagcctggc cctgtacctg 1800 tcggacgcgg aggcgcagca gttcctacgc tatgcccagg cctccgaggt gctgcagtct 1860 cgcaccaacg tcgcctacca tgtggtctat aaggaggggc agctgtaccc cgtcaacctc 1920 ctgcgcaacg tggccctgaa gaactcacag accccttacg tcttcctgtc ggatattgat 1980 ttcctgccca tgtacggact ctatgaatac ctacggaaat ccatatccca gcaggacctg 2040 accggccccc ccaaggctct tatcgttccc gcctttgaga ctctccgtta ccggctttct 2100 ttccccaagt ccaaggcaga gctactctcc atgctggata cgggggcgct ctacaccttc 2160 aggtaccacg tatgggagaa aggtcacgcc cccacagatt atgccaagtg gaggactgcg 2220 accaccccgt accgggtgga gtgggcgcca gacttcgagc cgtacgtagt ggtgagacgg 2280 gactgccctg agtatgacca gcgcttcctc ggctttggct ggaacaaagt gtcgcacatc 2340 atggagctgg atgcccagga acatgaactg ctggttctgc ctaatgcctt tatcatccac 2400 atgccccacg ctcccagctt cgacatctcc aagttccgct ccagcgaaaa ttaccgcctg 2460 tgcgtccagg cccttaagga ggagtttcac caagacttgt cccggcgcta cggttccgct 2520 gccctaaaat acctcacggc tgagcgcaac cggtgaactt ggtgcagaga cgctgccagg 2580 aaacactaca gagaggggtg tgaggacaat gggctcttcc gtgcctctgc tcttctacat 2640 acctgcctta tacagggcct tcattatagg aggtgcctgg ccctttaata ggaacgaacc 2700 agttgccacg ggggatgtta tttctgtggc ctttgtatgg gccaccggac aatcagctgc 2760 agttcccccg gccaatgggg acgcgagtcg tgatcactgg acggagaggg tctctccctg 2820 acgcatttca atatttctct ttatttatat tatttatgtg gataattccg atgaaatcaa 2880 actgacaggg caggattcct gattctattt ttaaaatata ttcagtttct ttttgcaata 2940 aaatgctgca atcgttaaaa aaaaaaaaaa aaaa 2974 // |
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