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EBI DbfetchID BC135969; SV 1; linear; mRNA; STD; VRT; 2653 BP. XX AC BC135969; XX DT 24-MAR-2007 (Rel. 91, Created) DT 11-SEP-2007 (Rel. 93, Last updated, Version 2) XX DE Xenopus tropicalis hypothetical protein LOC100124983, mRNA (cDNA clone DE MGC:122495 IMAGE:7652720), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2653 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2653 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2653 RA Klein S., Gerhard D.S.; RT ; RL Submitted (20-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998E0616902Q. DR ImaGenes; IRAKp961B04245Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Timothy Grammer (Richard M. Harland Laboratory, CC University of California, Berkeley) CC cDNA Library Preparation: Joint Genome Institute CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 245 Row: b Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 134024159. XX FH Key Location/Qualifiers FH FT source 1..2653 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="ElectroMAX DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropBrn3" FT /clone="MGC:122495 IMAGE:7652720" FT /tissue_type="Brain, adult" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8364" FT gene 1..2653 FT /gene="LOC100124983" FT CDS 331..1941 FT /codon_start=1 FT /gene="LOC100124983" FT /product="LOC100124983 protein" FT /db_xref="GOA:A4IID1" FT /db_xref="InterPro:IPR006759" FT /db_xref="UniProtKB/Swiss-Prot:A4IID1" FT /protein_id="AAI35970.1" FT /translation="MRLRNGTVATALVFITTFLSLSWYTAWQNGKEKLMAYQREFHALK FT ERLRIAEHRTLQRSSELHAILDHFRRMIKEANGSRDALNHFSDETQKLIKDLTNRKALQ FT VPNIYYHMPHLLNHDGSLQPAVQVGLGRTGVSVVMGIPTVKRRVKSYLKETLHSLIDKL FT SPEEKLDCVIIVFVGETDLEYVNSVVASLQKEFATEISSGLVEVISPPATYYPDLNNLK FT ETFGDSKERVRWRTKQNLDYCFLMMYAQRKGIYYIQLEDDIVAKQNYFSTIKNFALQLS FT SEDWMILEFSQLGFIGKMFQAPDITLIVEFILMFYKEKPIDWLLDHILWVKVCNPEKDA FT KHCDRQKSNLRIRFRPSLFQHVGLHSSLAGKIQKLTDKDFLKPLLHKIHVNPPAEVSTS FT LKVYQGHTLEKTYLGEDFFWAITPVAGDYILFKFDKPVNVERYLFRSGNPEHPGDQLWN FT TTVEVLPYRKDIVELRSDTKDKRLSDGFFRIGKFEDGLAEGPVNSYLNPISALRLSVLQ FT NSAVWVILNEIHIKRNPAD" XX SQ Sequence 2653 BP; 831 A; 490 C; 546 G; 786 T; 0 other; gaggaagggt ctgcgctgtg ctggtagaat atgttagcgg cgaaatgggc acaaggatga 60 ccggaacaca gcaggacgga ttgcgatatc gtcttaatca gcaagtggca gctgcctttc 120 accgggagaa tataagaaga ggatgttaga gaagctatgt taacagattt atttatattt 180 attaaaacat gaagacttcc actctttcct ctgggctctt gctgcagctt tattaatgca 240 ttgcttggat tgtggataaa agagattcat cacctttcaa cagagaaact gtgtgcaaaa 300 aactctaaac cagtgtgatg gtgcaatgaa atgaggctcc gaaatggaac tgtggcaacc 360 gcattagtgt tcattactac atttctaagc ctttcctggt atactgcctg gcaaaatggg 420 aaagagaagt tgatggccta ccaacgagaa tttcatgcac taaaggagcg cttacgtatt 480 gctgagcaca gaaccctgca gcgatcgtca gagctgcatg ctattcttga ccatttccgg 540 agaatgataa aagaagcgaa cgggagcaga gatgcattaa atcatttttc agatgaaact 600 caaaagctga taaaggattt aactaacaga aaagctcttc aagtgccaaa tatatattac 660 catatgcctc atttgctaaa tcatgatggg agccttcaac ctgctgtgca ggttggcctt 720 ggtagaactg gagtttcagt tgtcatgggg attcctactg taaaaaggag agtgaagtct 780 tacctgaaag agaccttgca ttcccttatt gataagctgt ctccagaaga aaaactagac 840 tgtgttataa tagtcttcgt tggagagaca gatctagaat atgttaacag tgttgttgcc 900 agtttgcaaa aagagttcgc cacagagatc agctctggtt tagtagaagt aatctctcct 960 cctgcaacgt attatcctga cctaaataat ttaaaggaga ctttcggaga ctcaaaggaa 1020 agagttaggt ggcgaactaa acaaaattta gactattgtt ttctcatgat gtatgctcag 1080 aggaagggca tttactacat ccagctagaa gatgatattg ttgccaagca gaattatttc 1140 agtacaataa agaattttgc acttcagctt tcttctgaag actggatgat tctagaattt 1200 tcccagttag gatttattgg taaaatgttt caggccccgg atattacact cattgttgag 1260 tttatattga tgttttacaa ggaaaaacct attgattggc ttctggacca tatattatgg 1320 gtgaaagttt gtaaccctga aaaagatgca aaacattgtg acaggcaaaa gtccaatctg 1380 cgaatccgtt tccgtccttc ccttttccag catgttggac tccattcgtc attggcaggg 1440 aaaatacaaa aacttacaga taaagatttc ctgaaaccat tgttgcataa aattcatgtg 1500 aacccacctg ctgaagtctc cacttcctta aaagtctatc aaggccacac gctggaaaag 1560 acttacttgg gcgaggattt cttctgggcc attacacccg ttgcaggaga ctacattctc 1620 tttaagtttg acaagccagt gaatgtagaa agatatcttt ttcgcagtgg aaaccctgaa 1680 catccaggag atcagttatg gaacacaaca gtggaggtcc ttccttaccg gaaagacata 1740 gtggagctga ggagtgacac caaagataaa cgcttgtcgg atggcttttt tagaataggt 1800 aaatttgaag acggcttagc agaagggcca gtgaactcct atttaaaccc tatttctgca 1860 cttcggcttt cggttttaca gaactctgct gtctgggtca ttctaaatga gatccatatt 1920 aaaagaaatc ctgcagactg acacccaaaa aagaagataa ttccagaagt ggcacaaagc 1980 ctgtcattgt cactgcctat tagggacttc tgcatgcacc ttgatatcat cctgttgtca 2040 atttccttgg actctacctc tgtgagatct actgtagcta ggattacatg cgctcttgtg 2100 aaaaccctat ggaaacaatg tgattttaac tgagaaacaa cctgtatcct aggtgcacac 2160 cattttgtag ccaacatatg gattttttta aaagaatatc atgaaatatg tacatataca 2220 ttccatgaga accgaaaaac ccccaaatgc tttttgtgca ggaaccaata ttccagttct 2280 attttgcttt tagtatgata cagattttgt agatgatcag ggaaatataa agtatattaa 2340 tatagatata tggatacaac catcttatac agattattta ttatggctta gaaaattgat 2400 atgtgcagta atatatttga ttgatatatg tttcttttat tatatttgac atgttatttg 2460 attactgagg gttgcctgtt ttacttggta tgggagtaca ggcactggca ctacaaccat 2520 tatatgctca ctaaaacata ggcaggcata ttgtttttgt gctggcacat tcccagtttc 2580 tgtagataac aatttctaca ataattccac aaaggaatct tattccttaa ggtaattaaa 2640 aaaaaaaaaa aaa 2653 // |
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