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EBI DbfetchID BC135935; SV 1; linear; mRNA; STD; VRT; 1031 BP. XX AC BC135935; XX DT 06-APR-2007 (Rel. 91, Created) DT 06-APR-2007 (Rel. 91, Last updated, Version 1) XX DE Xenopus tropicalis D-dopachrome tautomerase, mRNA (cDNA clone MGC:122117 DE IMAGE:7624627), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1031 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1031 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1031 RA Klein S., Gerhard D.S.; RT ; RL Submitted (20-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998B1716494Q. DR ImaGenes; IRAKp961C23249Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Richard M. Harland Laboratory, University of CC California, Berkeley CC cDNA Library Preparation: Richard M. Harland Laboratory CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 249 Row: c Column: 23 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 62859616. XX FH Key Location/Qualifiers FH FT source 1..1031 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="E. coli XL1-Blue derivative, Stratagene FT ElectroTen-Blue" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropTad5" FT /clone="MGC:122117 IMAGE:7624627" FT /tissue_type="Whole embryo, Tadpole (st. 36-41)" FT /note="Vector: pCS108" FT /db_xref="taxon:8364" FT gene 1..1031 FT /gene="ddt" FT CDS 17..373 FT /codon_start=1 FT /gene="ddt" FT /product="D-dopachrome tautomerase" FT /db_xref="GOA:Q28J83" FT /db_xref="InterPro:IPR014347" FT /db_xref="UniProtKB/Swiss-Prot:Q28J83" FT /protein_id="AAI35936.1" FT /translation="MPFVELDTNLPPQQVPQDLAEKLCSATATILSKPRERVNVTVRTG FT VSMVVGGSCAPCTQLLVSSIGVVGTAEQNKEHSAKFFQFLTENMGLEQDRILLRFVPLE FT PWQVGKKATVMTFL" XX SQ Sequence 1031 BP; 343 A; 208 C; 210 G; 270 T; 0 other; agagaaggga ggaattatgc cattcgtgga gctggacact aacctgccgc cgcaacaagt 60 accccaggac ttggcggaga agctctgctc agctactgct accattctga gcaaaccaag 120 ggagagggta aatgtgactg tgaggactgg agtctccatg gtagtgggag gttcatgtgc 180 accatgcacc caactgcttg tctcctctat cggagtggtg ggaacagcag aacagaacaa 240 agaacacagt gctaagttct ttcagttcct gacagaaaac atgggccttg aacaggacag 300 gattttgctg aggtttgttc cattagagcc atggcaggtt ggaaaaaaag caacagtcat 360 gacgtttcta taacttctca agaagttaga gaccacaact gcacagaatc accatatcca 420 tctctactat gaccaagata ccgagtgtac agccatctgt atgctacatg tcacctgata 480 ttacacaagc tgtaaaaaaa ttatcacagt ccctccaaaa aaggggtccg aacacaacag 540 attaatttgc aaggttaatc agaacccatt ttagccaccc aaccaaaaat ctcatgcttt 600 ctttctgggt aaaagacaaa caccatactg ttcagtgtac ttgatggaac tagttgagct 660 gctgtatatt ttactgaatt gcaacctgca gctgtccaca gacaccgcta tagtatcaag 720 tagatacaag tctaaagcag ttaagtagta ataagtattc ttgaaaaatg cttcaacaat 780 tatctgtgaa ctgaagaagc gacttggata actggtgaaa tgtttttaag attacatagc 840 aaagtccgtt gatttagtca tatctgtact tgataaccat ctatcatgct ttcttggtgt 900 ggtctgcaat acatgttttc tctgacttat gaaaggcaac aagactgtct actctgaagt 960 tgcattccat gatgtatttt tggtaaataa aagtcattat gaataaaaaa aaaaaaaaaa 1020 aaaaaaaaaa a 1031 // |
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