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EBI DbfetchID BC135695; SV 1; linear; mRNA; STD; VRT; 1218 BP. XX AC BC135695; XX DT 24-MAR-2007 (Rel. 91, Created) DT 18-OCT-2008 (Rel. 97, Last updated, Version 10) XX DE Xenopus tropicalis Dual specificity phosphatase DUPD1, mRNA (cDNA clone DE IMAGE:7630743), partial cds. XX KW . XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1218 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1218 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1218 RA Klein S., Gerhard D.S.; RT ; RL Submitted (20-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A1316510Q. DR ImaGenes; IRAKp961E06249Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Richard M. Harland Laboratory, University of CC California, Berkeley CC cDNA Library Preparation: Richard M. Harland Laboratory CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 249 Row: e Column: 6 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 134026189. XX FH Key Location/Qualifiers FH FT source 1..1218 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="E. coli XL1-Blue derivative, Stratagene FT ElectroTen-Blue" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropTad5" FT /clone="IMAGE:7630743" FT /tissue_type="Whole embryo, Tadpole (st. 36-41)" FT /note="Vector: pCS108" FT /db_xref="taxon:8364" FT gene <1..1218 FT /gene="dupd1" FT CDS <1..684 FT /codon_start=1 FT /gene="dupd1" FT /product="dupd1 protein" FT /db_xref="GOA:A4IHU7" FT /db_xref="InterPro:IPR000340" FT /db_xref="InterPro:IPR000387" FT /db_xref="InterPro:IPR020405" FT /db_xref="InterPro:IPR020417" FT /db_xref="InterPro:IPR020422" FT /db_xref="UniProtKB/Swiss-Prot:A4IHU7" FT /protein_id="AAI35696.1" FT /translation="GCSLRYTRDTAILVTRQKMPADTPIRKKPNAYASVVDPDTGYCTP FT GAFELERLFWHGAPKYNHVNEVWPNLYIGDEKTALDRYSLEKNGFTHILNAAHGRWNVD FT TGPEYYSDITVEYYGVEAEDLPSFNLSQFFYPAAQFIRNALSSPSSKVLVNCAMGRSRS FT ASLVLAYLMIYENMTVVDSIMQVLKHRCILPNRGFLKQLRELDIQLALERRGTEDTAKK FT AQKDD" XX SQ Sequence 1218 BP; 413 A; 236 C; 250 G; 319 T; 0 other; ggctgttctc tcaggtacac cagggatact gctatattag taaccagaca gaagatgcct 60 gctgacacac ccatccgaaa aaagcccaat gcctatgctt ctgttgttga tccagacacg 120 gggtactgta caccaggggc atttgaacta gagagactct tctggcatgg agcaccaaaa 180 tataatcatg ttaatgaagt gtggcctaat ctttatattg gagatgagaa aacggcattg 240 gaccgataca gccttgagaa gaatggtttc acccacattt tgaatgcagc tcatgggcgc 300 tggaatgttg acactggacc tgagtattac agtgatatca cagtcgaata ttatggagtg 360 gaagcagaag atttaccgtc ctttaacctt agtcagttct tttaccctgc tgctcaattt 420 atccgcaatg cgctaagcag ccctagcagc aaggtgttgg tgaactgcgc tatgggtcga 480 agtcgttctg cctccctggt tctggcatat ctcatgatct atgagaacat gactgttgtt 540 gactcaatca tgcaagtgtt gaaacatcga tgcattctgc ccaaccgggg tttccttaag 600 cagttaagag agcttgatat tcagttggct ctggagaggc ggggcacaga ggacacagcc 660 aaaaaggcac aaaaggatga ttaacacaaa cagtaaatat aagaaatgac agaatgtggc 720 aaacctctgt tgcaacaatg aaaaaaaaat gagggaaacg aactggcctt cctaatccag 780 gtgaacttca aagtcagcca aaatactgtc cctatgcaga taactcaaat atctttaaaa 840 ccattagtct ttttgcacaa gtgaagaaaa cctttgatca acaagaggag caattatttt 900 attggagaac taatttcata gttacagtat tcaaataaca aacgtagact ctgtacatgg 960 acttttaaag gtgcccttga aagagctctt gcatggatca tataagaccc gaccattcat 1020 gttagactaa ggatgcagca ctggttttgt ttaaactgaa tgccttcaca ctaaactctt 1080 ccaatttaga aacctgcatg agttcatatg aaaccaatat aataagaatg tggttttagg 1140 ataacatttg tatatctgat tgcattaaag attacgtata aaaaaaaaaa aaaaaaaaaa 1200 aaaaaaaaaa aaaaaaaa 1218 // |
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