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EBI DbfetchID BC133855; SV 1; linear; mRNA; STD; VRT; 1514 BP. XX AC BC133855; XX DT 17-MAR-2007 (Rel. 91, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Danio rerio si:dkey-22o20.1, mRNA (cDNA clone MGC:162076 IMAGE:8731762), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1514 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1514 RG NIH MGC Project RA ; RT ; RL Submitted (02-MAR-2007) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000001214; Danio_rerio. DR Ensembl-Gn; ENSDARG00000021820; Danio_rerio. DR Ensembl-Gn; ENSDARG00000031930; Danio_rerio. DR Ensembl-Gn; ENSDARG00000040547; Danio_rerio. DR Ensembl-Gn; ENSDARG00000052723; Danio_rerio. DR Ensembl-Gn; ENSDARG00000062280; Danio_rerio. DR Ensembl-Tr; ENSDART00000008336; Danio_rerio. DR Ensembl-Tr; ENSDART00000027829; Danio_rerio. DR Ensembl-Tr; ENSDART00000059344; Danio_rerio. DR Ensembl-Tr; ENSDART00000082305; Danio_rerio. DR Ensembl-Tr; ENSDART00000089855; Danio_rerio. DR Ensembl-Tr; ENSDART00000102468; Danio_rerio. DR Ensembl-Tr; ENSDART00000104235; Danio_rerio. DR ImaGenes; IMAGp998M0819131Q. DR ImaGenes; IRAKp961H07304Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Yi Zhou/Dr. Leonard Zon CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 304 Row: h Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 134085348. XX FH Key Location/Qualifiers FH FT source 1..1514 FT /organism="Danio rerio" FT /lab_host="T1-resistant E.coli DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_23" FT /clone="MGC:162076 IMAGE:8731762" FT /tissue_type="Testes, pool of 1 yr old X Tu males" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..1514 FT /gene="si:dkey-22o20.1" FT /note="synonym: b3gat1" FT CDS 32..1036 FT /codon_start=1 FT /gene="si:dkey-22o20.1" FT /product="si:dkey-22o20.1" FT /db_xref="GOA:Q5CB02" FT /db_xref="InterPro:IPR005027" FT /db_xref="UniProtKB/TrEMBL:Q5CB02" FT /db_xref="ZFIN:ZDB-GENE-050419-21" FT /protein_id="AAI33856.1" FT /translation="MPKRRDILAIVLIVLPWTLLITVWHQSAIAPLLAIRKDDATETRH FT ENGPATDSKEYCSQDKDIVEVVRTEYVYTRPPPWSDVLPTIHVITPTYSRPVQKAELTR FT LANTFLHVPNLHWILVEDSQRRTPLVTRLLRETGLNYTHLNVETPRNYKLRGDTRDPRI FT PRGTMQRNLALRWLRETFNSNSSQAGIVYFADDDNTYSLELFEEMRSTRKVSVWPVAFV FT GGLRYESPKVNAAGKVYGWKTVFDPHRPFAIDMAGFAINLRLILIKPQAYFKLRGVKGG FT YQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNEGKKGFTDPNVEI" XX SQ Sequence 1514 BP; 456 A; 360 C; 362 G; 336 T; 0 other; gtaatgacca ggcatagaac caaccctgga gatgccgaag agaagagata ttcttgccat 60 cgtgttgatt gtgttaccat ggaccctcct catcactgtg tggcaccaaa gtgcaattgc 120 tcccctgctt gccatccgaa aggatgacgc gacggagact agacacgaga atgggccggc 180 aacagactca aaagaatact gctcacagga caaggacata gtagaggtgg ttcgtacaga 240 atatgtgtat acaagacctc caccctggtc tgacgtttta cccaccattc atgtcatcac 300 cccgacatac agccgtcctg tgcagaaagc agagttaacg cgattggcca acacattcct 360 tcatgtgccc aacctgcact ggatcctggt ggaggactct cagaggagaa cccctctggt 420 cacgaggctt ctgagggaaa ccgggctgaa ctacacacac ctcaatgtgg agaccccacg 480 gaactacaag ctgcgagggg acacgagaga tcccaggatt ccacgtggca ccatgcagag 540 gaatctggct ctgagatggc taagggagac cttcaattcc aacagcagcc aggcgggaat 600 cgtttacttc gcagatgatg ataatacgta cagcttggag ctgtttgagg agatgcggtc 660 cactcgtaaa gtatcggtgt ggccagttgc gtttgttgga ggtttgcggt acgagtcccc 720 aaaggtcaat gcagcaggaa aagtatacgg ctggaaaaca gtattcgacc ctcaccgtcc 780 ctttgccatc gatatggcag ggtttgccat caacctgagg cttattctta ttaagcctca 840 ggcctatttc aagttacgag gggttaaggg aggctaccag gagagcagcc tgctcagaga 900 gctggtcaca ctcaatgacc tggaacccaa agccgccaac tgcactaaga ttcttgtgtg 960 gcacacgcgg acggaaaaac ctgtcctggt gaacgaaggc aaaaaaggct tcacagaccc 1020 aaatgtggag atctgacatc tgcttcggcg tcgggatgta tccagcagga cccgaaaggg 1080 aatggcaggc tgtaattacc cactactaca tttttctgaa cagtttgaat gctttgtcct 1140 gtaacccaca actaaacaag ctcaacaata tggacctatt attacctgat gtaaagcaca 1200 gaatagtctt tttaaaggca ataccatcag tattttacaa gaacaaaaca agagccagaa 1260 aagaaatgtt ggtgtatatt gatgagggga acatctgtga cctgataaaa ctgctcactt 1320 ccaggatgaa ttttataaac tctacttaaa agagcccccc cacaaaagta cgttacagca 1380 gtctcaaagt gctgacgaag agcgtcatcg atttaagatc gtcattgtcc ctacgcgtct 1440 gacggactga cacttaaaca taaagaaggg aatgtcttcg ttttgtttta aaaaaaaaaa 1500 aaaaaaaaaa aaaa 1514 // |
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