 |
|
EBI DbfetchID BC129663; SV 1; linear; mRNA; STD; VRT; 1129 BP. XX AC BC129663; XX DT 03-JAN-2007 (Rel. 90, Created) DT 18-OCT-2008 (Rel. 97, Last updated, Version 10) XX DE Xenopus laevis Pyrroline-5-carboxylate reductase 3, mRNA (cDNA clone DE IMAGE:8540347), partial cds. XX KW . XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1129 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1129 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1129 RA Klein S., Gerhard D.S.; RT ; RL Submitted (22-DEC-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998E1718633Q. DR ImaGenes; IRAKp961I18297Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Raphael Thuret, Albert Chesneau, Laurent Sachs CC and Nicolas Pollet CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 297 Row: i Column: 18 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 120538282. XX FH Key Location/Qualifiers FH FT source 1..1129 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_olfb" FT /clone="IMAGE:8540347" FT /tissue_type="Olfactory bulbs, metamorphosis - Niewkoop and FT Faber stages 57 to 66, plus adults, pooled, normal, FT undetermined sex" FT /note="Vector: pCS111" FT /db_xref="taxon:8355" FT gene <1..1129 FT /gene="pycrl" FT CDS <1..823 FT /codon_start=2 FT /gene="pycrl" FT /product="pycrl protein" FT /db_xref="GOA:A1L2Q8" FT /db_xref="InterPro:IPR000304" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:A1L2Q8" FT /protein_id="AAI29664.1" FT /translation="AASPRVSLPVGCIGAGRMAQGILEGILHKGEITPQNVMVSAPTDR FT NLEKLKARGCCTSHDNRSVVSNCRVVFLATKPHIIPSVLQEIYPKVTADHLIISMAAGV FT TLETLEKNLPPGSKVIRMMPNLPCVLQEGAIVFSRGRCAGEVEADVFESLVRTCGLCVE FT VPQSCIDIHTGVSGSGVAYVYTFAEALADGAVKMGMPSALARQIVAQTLLGAGKMLLQS FT EEHPASLRADVCTPGGTTIFGLHELEKGGLRAAVMNAVEAATTRAMDMGRK" XX SQ Sequence 1129 BP; 308 A; 253 C; 323 G; 245 T; 0 other; ggccgcttct cctcgtgtct cactgccggt cggatgtatc ggagccgggc gaatggctca 60 ggggatcctg gaggggattc tacacaaagg ggaaatcaca cctcagaatg tcatggtgag 120 tgccccaacg gatcgcaatc tggagaaatt gaaggctcgc ggctgttgca catcacatga 180 taaccgatct gtcgtctcta actgccgagt ggtgtttctg gccaccaagc cccatatcat 240 tccctccgtc ctacaagaga tttaccccaa agtgacggct gatcacctga tcatttctat 300 ggctgccgga gtcacgctgg agaccctgga gaagaatctg cccccgggga gtaaagttat 360 ccgcatgatg cccaacttgc cctgtgtgct tcaggaaggg gcaattgtat tttcgcgggg 420 gcgatgtgcc ggtgaggtgg aggccgatgt gtttgagagt ctggtccgta cgtgtggtct 480 gtgtgtggag gtcccacaat cctgtatcga cattcacacg ggggtgagcg gcagcggggt 540 ggcttatgtt tacacattcg ctgaagcgct ggcagacggg gcagttaaga tggggatgcc 600 cagtgccctc gcccgacaga ttgtagctca gactttactg ggggcaggca agatgcttct 660 gcagagtgag gagcacccag cgagtctcag agcggacgtg tgtaccccag gagggacgac 720 aatttttggg ctccacgagc tggagaaggg gggcctcagg gcggcagtga tgaacgctgt 780 agaagccgct accacaaggg caatggatat ggggagaaag tagaactatc gctactgatc 840 ctactgggca tgaaaacggt tcagagaagt ggcagttgtg ggtcaggctg taaattagac 900 acatgattgt gtataagaac tggaccaata gaaactctgc tccacctgct gcctcccaat 960 atggctcctg aggctgtgat gtgaaatagg agaatatcgt aaatggaaaa gacaaatgta 1020 tcaaataaat acataaaatt cccaaattct gccggaaaaa aaaaactgtt gcacaaattc 1080 tgaagaataa aatacacaat gattaaaaaa aaaaaaaaaa aaaaaaaaa 1129 // |
|