 |
|
EBI DbfetchID BC129595; SV 1; linear; mRNA; STD; VRT; 1303 BP. XX AC BC129595; XX DT 17-FEB-2007 (Rel. 90, Created) DT 27-JUN-2007 (Rel. 92, Last updated, Version 2) XX DE Xenopus laevis hypothetical protein LOC100037186, mRNA (cDNA clone DE MGC:160268 IMAGE:8528917), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1303 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1303 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1303 RA Klein S., Gerhard D.S.; RT ; RL Submitted (22-DEC-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998I1118603Q. DR ImaGenes; IRAKp961E10297Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Raphael Thuret, Albert Chesneau, Laurent Sachs CC and Nicolas Pollet CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 297 Row: e Column: 10 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 125858573. XX FH Key Location/Qualifiers FH FT source 1..1303 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_int_m" FT /clone="MGC:160268 IMAGE:8528917" FT /tissue_type="Intestine, metamorphosis - Niewkoop and Faber FT stages 56 to 62, pooled, normal, undetermined sex" FT /note="Vector: pCS111" FT /db_xref="taxon:8355" FT gene 1..1303 FT /gene="LOC100037186" FT CDS 8..1090 FT /codon_start=1 FT /gene="LOC100037186" FT /product="LOC100037186 protein" FT /db_xref="GOA:A2VD83" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/Swiss-Prot:A2VD83" FT /protein_id="AAI29596.1" FT /translation="MKALILVGGYGTRLRPLTLSVPKPLVDFCNKPILLHQVEALVKAG FT VTHVILAVSYMSDMLEKEMKEQEKRLGIRISMSHEKEPLGTAGPLALARELLTENSEPF FT FVLNSDVICDFPFEDMVRFHKHHGKEGTIVVTKVEEPSKYGVVIYEAESGRIQRFVEKP FT QVFVSNKINSGLYIFSPAVLDRIQLRPTSIEKEIFPVMAQEGQLFALELQGFWMDIGQP FT KDFLTGMCMYLQSVRHKHPERLHVGPGFTGNVLVDPTAKIGQNCSIGPNVTIGPGVTVE FT DGVRIKRCSIMKGSRLHSHSWLQSSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNG FT ANVLPHKCISESVPEPRIIM" XX SQ Sequence 1303 BP; 373 A; 284 C; 332 G; 314 T; 0 other; ggccaatatg aaagcactaa ttctcgttgg tggatatgga accaggctgc ggcctttaac 60 actgagtgtg ccaaagccat tagtagactt ctgtaacaaa cccatcctcc tgcaccaagt 120 ggaggccctg gtaaaggctg gagtcacaca tgtgatcctt gctgtcagct acatgtcaga 180 catgttagaa aaggaaatga aggaacagga aaagaggctt ggtatccgaa tctcaatgtc 240 ccatgaaaag gagcctttgg gtacagctgg tcctttagcc ctggcaaggg aactactgac 300 agaaaactcg gaaccattct ttgtccttaa cagtgatgtc atttgtgact ttcctttcga 360 ggatatggtg agattccata aacaccacgg gaaagaagga accatcgtgg taacaaaggt 420 agaggaacct tcaaaatatg gagttgttat atatgaagca gaatcagggc gaatccaacg 480 ctttgtggag aagccacagg tgtttgtgtc caacaagatc aactcaggac tgtacatctt 540 ctccccggct gtgctggatc gtattcagct acgcccaacc tccatagaaa aggagatttt 600 ccctgttatg gctcaggagg ggcagttatt tgcattggag ctgcaagggt tctggatgga 660 cattggtcag cctaaagact tcctgaccgg catgtgtatg tacctccagt ctgtcagaca 720 caagcaccca gagcggcttc atgttggacc tggattcact gggaatgttc tggtggatcc 780 cacagcgaag attggtcaga actgcagcat tggccctaat gtgactattg gccctggcgt 840 gactgtagag gacggagtgc ggatcaagcg ctgctctatc atgaaaggct ccaggctgca 900 ctcccattcc tggcttcagt cctccattgt tggttggagc tcatcagtag gacagtgggt 960 gcgcatggag aatgtgactg tgctggggga agacgtcatt gttaatgatg aactttacct 1020 aaatggagcc aacgtcctgc cacacaagtg catctctgag tctgtgccag aaccacggat 1080 aatcatgtag aactacaaga ctcttgctca gacaacacat ccctctatta tgattgggga 1140 ctatgaacag taatctgtgc tgtccagcaa caagggggtt ttgctcaatt gtacagagag 1200 gagcagagaa ataaagaaga gtacaatctc aggatatgat atcctctaca gtcatgggta 1260 tacaggctgg cacggtgcta aaaaaaaaaa aaaaaaaaaa aaa 1303 // |
|