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EBI DbfetchID BC129548; SV 1; linear; mRNA; STD; VRT; 1993 BP. XX AC BC129548; XX DT 17-FEB-2007 (Rel. 90, Created) DT 17-FEB-2007 (Rel. 90, Last updated, Version 1) XX DE Xenopus laevis xice-a protein, mRNA (cDNA clone MGC:160213 IMAGE:8462234), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1993 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1993 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1993 RA Klein S., Gerhard D.S.; RT ; RL Submitted (22-DEC-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998N2418429Q. DR ImaGenes; IRAKp961B15297Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Jacques Robert CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 297 Row: b Column: 15 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1993 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_sple_PHA" FT /clone="MGC:160213 IMAGE:8462234" FT /tissue_type="Spleen, 2-3 years old, 4 females + 2 males, 6 FT outbreads" FT /note="Vector: pCS111" FT /db_xref="taxon:8355" FT gene 1..1993 FT /gene="xice-a" FT CDS 43..1203 FT /codon_start=1 FT /gene="xice-a" FT /product="xice-a protein" FT /db_xref="GOA:P55865" FT /db_xref="InterPro:IPR001309" FT /db_xref="InterPro:IPR001315" FT /db_xref="InterPro:IPR002138" FT /db_xref="InterPro:IPR002398" FT /db_xref="InterPro:IPR011029" FT /db_xref="InterPro:IPR011600" FT /db_xref="InterPro:IPR015917" FT /db_xref="InterPro:IPR016129" FT /db_xref="InterPro:IPR017350" FT /db_xref="UniProtKB/Swiss-Prot:P55865" FT /protein_id="AAI29549.1" FT /translation="MTAQLNKVRRAIIDGCNPAMISDLLDDLREKNVLVDSEVEHIKES FT NNTNRDRCRAMIDSVKKKGDDPSNILLESLVKNHKTLAKSLGLHEPPMAPVPIQEHNAD FT TIKNKDIKGVIPCSAEEFKKIQDTQGDKIYDVRKREGRKGLALIICNEKFENLNERHGA FT KVDLDGMTKLLNELGYQVHPHTNLTKTEMVKVMKEFAAQEEHADSDSTFIVLMSHGDRQ FT GVCGTDSKKTEKEKGQYEVTNLLEIDEIFSTFNNVNCSKLRNKPKVIIIQACRGENKGG FT LLVRDDVASPPLEDDGLHFVQREADFICFCSSTPDTVSWRDPTKGSVFITHLIEKMNEY FT AHCQPLGDIFLEVQSLFKDKCPNSRSQMPTQERCTLTKKFYLFPGY" XX SQ Sequence 1993 BP; 659 A; 395 C; 415 G; 524 T; 0 other; tttatcctgt gtacattata gctgcattgc tgctcgccag atatgacagc tcaactgaat 60 aaagtgcgca gagccattat agatggatgt aaccctgcaa tgataagtga tttactagat 120 gatttgcgag aaaaaaatgt acttgtggac tccgaagtgg aacacatcaa agagagcaat 180 aacacaaaca gggacagatg ccgggccatg attgacagtg taaagaaaaa aggagacgac 240 ccaagcaata ttctacttga gagcttggtg aagaatcaca aaactctcgc caaaagcctg 300 ggactccacg aacctcctat ggcacccgtg cccattcaag aacataatgc ggatacaatt 360 aagaacaaag acatcaaagg tgtaattcct tgttctgctg aagaattcaa gaaaattcag 420 gacactcaag gagataagat ttatgatgtg cggaagcgtg aaggacggaa gggcttggct 480 cttataatct gcaatgaaaa gtttgagaat ctgaacgagc gccatggagc caaggttgat 540 ctggatggga tgaccaaatt actaaatgaa ttaggatacc aagtccatcc acatacaaac 600 ttgacaaaaa cagaaatggt gaaggtgatg aaggagtttg ctgcccagga ggagcatgca 660 gattcagaca gcaccttcat agttctgatg tctcatggag ataggcaggg agtctgtggg 720 acagacagca agaagacaga aaaagaaaaa ggacagtatg aggtgactaa cctgctggag 780 atcgatgaaa tcttttctac attcaataat gtcaattgct ctaaattgcg gaacaaaccg 840 aaagtcatca ttattcaggc ctgccgtggg gaaaataaag gtggattatt agtccgtgat 900 gatgtggctt cgccccctct ggaagatgat gggctccatt ttgtccagag agaggcagac 960 tttatatgct tctgttcttc aactccagac actgtttctt ggagagatcc tacaaagggt 1020 tccgtgttca tcacacatct gattgagaaa atgaatgaat acgctcattg ccaaccactg 1080 ggggatatct ttcttgaagt gcagtccttg tttaaggata aatgcccaaa ctcacgctca 1140 cagatgccca cacaagagag atgtacactg acaaagaaat tttacctttt cccaggctac 1200 taatgtaagg aattaatgaa tggattaaag aacatcaaga gctttttgtt taggtttttt 1260 ccctctgcag caaaatgggt taaagaagaa ctaaagacta actaaagatg atagccagaa 1320 atgttgtaca ttatgttttg tgcttctgta ccagcccaag gcaaacacag ccctttagca 1380 gtaaggatct gtgtctccaa agatgcccca gtagctcctc atcttctttt ctgctgattc 1440 actgcacatg ctctgtgctg ctgtcactta ctgagcttag ggacccactt acaatatata 1500 gtacacatag aatataattg tcacaatata aggctttatt aatacagata attactacat 1560 cgcagctcag aaaccagtgc aattagcatc agaatttaac aatcagccct gtagcatctg 1620 tttatattac agacaaaccc ccctaagccc ctaagcttag cttctcaaca gctgctcaga 1680 gcccaccgag tatgtgaaag tcacagacac ttttcaagat ggtgaccccc tgtgacaagt 1740 ttgaagttct ggatcattgc tgctattgac aagctgaaac tttaggctgg tgcaataagt 1800 tcagtatata aaatatggca tttttggcca tattcatttt caggctttag ttctcctgta 1860 agtgtttagg ggtgtctctt attccttaca acatgacggt agcatttaaa catttttacc 1920 actgtgcctt aaaataatga gcaatattaa aataaaaata catttttaaa aagaaaaaaa 1980 aaaaaaaaaa aaa 1993 // |
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