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EBI DbfetchID BC129195; SV 1; linear; mRNA; STD; VRT; 2413 BP. XX AC BC129195; XX DT 03-JAN-2007 (Rel. 90, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Danio rerio zgc:158305, mRNA (cDNA clone MGC:158305 IMAGE:6969284), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2413 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2413 RG NIH MGC Project RA ; RT ; RL Submitted (22-DEC-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000007371; Danio_rerio. DR Ensembl-Gn; ENSDARG00000010137; Danio_rerio. DR Ensembl-Gn; ENSDARG00000013881; Danio_rerio. DR Ensembl-Gn; ENSDARG00000032458; Danio_rerio. DR Ensembl-Gn; ENSDARG00000055754; Danio_rerio. DR Ensembl-Gn; ENSDARG00000070870; Danio_rerio. DR Ensembl-Gn; ENSDARG00000074556; Danio_rerio. DR Ensembl-Gn; ENSDARG00000077773; Danio_rerio. DR Ensembl-Tr; ENSDART00000002698; Danio_rerio. DR Ensembl-Tr; ENSDART00000005329; Danio_rerio. DR Ensembl-Tr; ENSDART00000015773; Danio_rerio. DR Ensembl-Tr; ENSDART00000033018; Danio_rerio. DR Ensembl-Tr; ENSDART00000040424; Danio_rerio. DR Ensembl-Tr; ENSDART00000075564; Danio_rerio. DR Ensembl-Tr; ENSDART00000078148; Danio_rerio. DR Ensembl-Tr; ENSDART00000104395; Danio_rerio. DR Ensembl-Tr; ENSDART00000109532; Danio_rerio. DR ImaGenes; IMAGp998P1914616Q. DR ImaGenes; IRAKp961H22293Q. DR ImaGenes; IRBOp991H0478D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Chi-Bin Chien CC cDNA Library Preparation: Invitrogen Corp CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 293 Row: h Column: 22 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 113865946. XX FH Key Location/Qualifiers FH FT source 1..2413 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NCI_CGAP_ZEmb3" FT /clone="MGC:158305 IMAGE:6969284" FT /tissue_type="Embryo, zebrafish whole embryo 72 hpf" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:7955" FT gene 1..2413 FT /gene="zgc:158305" FT /note="synonym: pi4kII beta" FT CDS 164..1669 FT /codon_start=1 FT /gene="zgc:158305" FT /product="zgc:158305" FT /db_xref="GOA:Q49GP5" FT /db_xref="InterPro:IPR000403" FT /db_xref="UniProtKB/Swiss-Prot:Q49GP5" FT /db_xref="ZFIN:ZDB-GENE-070112-990" FT /protein_id="AAI29196.1" FT /translation="MMAECDPTDGEPGNGSGDSTPETNFLSSEVPAVLFEKTRSAPSLG FT LSLNPGAAVRISDSTESVLTELEADGSGEEALLLPGPAGSLSPRAGKEKRTRRNMLSSS FT SDNLASPGNSSGEFNHFPEDPEFGEIIQRAEQAIENGVFPERISQGSSGSYFVKDPKGK FT IIGVFKPKSEEPYGHLNPKWTKYFHKVCCPCCFGRGCLIPNQGYLSEAAASLVDQKLGL FT WIVPKTKVVHLASETFHYNAIDRAKSRGKKYALEKVPKVGRRFHRVGLPPKVGSFQLFV FT EGYHEADFWLRKFEAEPLPENMRKQLQSQFERLVVLDYVIRNTDRGNDNWLIKYEKPGD FT GELTEKESEWTDPKDSAIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVAFSQETR FT DLVLSRISDMNFVQDLCEDLYEMFRTDKGFDKTMFEKQMSVMRGQILNLTQALKDGKSP FT IQLVQMPRVVVERSRSGGQGRVVQLGNAFTQTFHCKRPFFTSW" XX SQ Sequence 2413 BP; 731 A; 488 C; 598 G; 596 T; 0 other; gtgacggatg atgtggacgt gaaacggttg agagcatcag cgtgtcttca aggaagagga 60 aaaaaacata taaactcttt aagacggact cacggatatg acgcgggtat tttgagaggt 120 gtctgagttt ctctggacac agaccgaaca cgcactgtcc acgatgatgg cagaatgcga 180 ccccaccgac ggcgagccgg ggaacggcag cggagattca acaccggaga cgaactttct 240 ctcttcggag gtgccggctg tgttatttga aaaaacccgg tcggcaccgt cgttgggact 300 ctcgttgaac cccggagcag ctgtccggat ttcggactcg acggaaagcg tgttgacgga 360 gctggaagct gacgggtccg gcgaagaggc gctcctgtta ccgggaccag ccgggagcct 420 ctcacctcga gctggaaaag agaaaaggac acggaggaac atgctcagct catcatccga 480 taatctagca tctccaggta atagcagtgg agaattcaac catttcccag aagacccaga 540 gttcggggag attatccaga gggccgaaca ggccatagaa aacggcgtct ttcctgaacg 600 catctcacaa ggatctagtg gaagttactt tgtcaaggat cctaaaggga aaatcattgg 660 ggtattcaaa ccaaaatcag aggagcctta tggtcactta aacccaaaat ggaccaaata 720 cttccataag gtttgctgcc cgtgctgttt tggccgtggc tgcctcattc ccaatcaggg 780 ctacctctct gaggcagctg cctcacttgt ggaccaaaaa ctgggtttgt ggattgtacc 840 caaaactaag gttgtacatt tggctagcga gacttttcac tataatgcaa ttgaccgtgc 900 caaatcccgt ggtaagaaat atgcacttga gaaagtcccc aaagttggac gacggtttca 960 cagagttggc cttcctccaa aggtgggctc atttcagctg tttgtggagg gctatcatga 1020 agctgacttc tggctgagga agtttgaagc agagcctctt ccagagaaca tgaggaaaca 1080 gctgcagtct cagtttgaga ggctggttgt tttggattac gttattagaa acacagacag 1140 agggaatgat aactggttga tcaagtatga gaagccgggc gatggagagc tgacagagaa 1200 ggaatctgag tggactgatc caaaagactc ggccataaaa attgcagcta tagataatgg 1260 tttggccttc ccctttaaac atcctgatga gtggagagca tatccgttcc actgggcttg 1320 gttgcctcag gccaaagtgg ccttttccca ggagacccga gaccttgtgc tatctcgcat 1380 ttccgatatg aactttgtac aggacctctg tgaggacctt tatgagatgt tcaggacgga 1440 taaaggattc gacaaaacca tgtttgagaa acagatgtcc gttatgagag gacagatctt 1500 aaacctgaca caggctttga aagatgggaa gagcccgatc cagctagtgc agatgcctcg 1560 tgtggtggtg gagcggagcc gcagtggggg ccagggccgc gtggttcagc taggtaacgc 1620 tttcactcag acatttcact gcaagagacc cttcttcacc tcctggtaaa agagctgcac 1680 agacagaacc agtttacatg gactacagtc ttaaaccgga ctaaggtgag tttcagacac 1740 tggatggaga actttcagat gaagatttcc agggtgaatc gtagcaaagt gagacacttg 1800 caggactgca catggagaat ctgaggcctt tcgttttcct gagccttttc tcagtttctc 1860 tggatggatt gtctaaaggg aatcaatcaa atgttgaaaa tgctgaagtt tttgtgtgcg 1920 acagcctttc tcaactgcca attgttttat aagtataact atagatctta ttaatgaaga 1980 atgatgcatt cagattaatt taaacttgaa aataaacaat gcttgaatgt aacttgcaag 2040 tttacatttt acacttcaca tttcaacacc aaggagcact ggtgaccgcg gtatttaata 2100 tgatgaatgt atttgctggt tgtgtaacag gacatgcgtt tgttaaaggc gggagctttt 2160 aagcccctgt tgaaagtgta attccaaaag gtttttaatt ctttttctct tgttctctat 2220 cacgcaatcc tgtgtatgca tcttggactt tgtattccag cctaacggtt gtttaagtag 2280 agcggtatat ttaaagtgaa taaaaaaata aagctttgag atttcaaaaa aaaaaaaaaa 2340 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2400 aaaaaaaaaa aaa 2413 // |
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