EBI Dbfetch

ID   BC126762; SV 1; linear; mRNA; STD; MAM; 1562 BP.
XX
AC   BC126762;
XX
DT   11-DEC-2006 (Rel. 90, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 2)
XX
DE   Bos taurus protein O-fucosyltransferase 1, mRNA (cDNA clone MGC:155274
DE   IMAGE:8499461), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1562
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000016231; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000021595; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000021596; Bos_taurus.
DR   ImaGenes; IMAGp998N0318526Q.
DR   ImaGenes; IRAKp961N14289Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 289 Row: n Column: 14.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1562
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-30"
FT                   /clone="MGC:155274 IMAGE:8499461"
FT                   /tissue_type="Fetal muscle , female fetus 6 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1562
FT                   /gene="POFUT1"
FT   CDS             42..1097
FT                   /codon_start=1
FT                   /gene="POFUT1"
FT                   /product="POFUT1 protein"
FT                   /db_xref="GOA:Q7YRE6"
FT                   /db_xref="InterPro:IPR019378"
FT                   /db_xref="UniProtKB/TrEMBL:Q7YRE6"
FT                   /protein_id="AAI26763.1"
FT                   /translation="MGAAAWAPSLLPPRVSLLLLLLPLPGLPVGSWDPAGYLLYCPCMG
FT                   RFGNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNVHVSYQKYFKLEPLQAYHR
FT                   VISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFN
FT                   KSELFAGISFSASYKDQWIQRFSPEEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMV
FT                   RTGEAQIHAHLIRPYVGIHLRIGSDWKNACAMLKDGTAGAHFMASPQCVGYSRHTTAPL
FT                   TMTMCLPDLKEIRRALKLWVTALNAQSVYIATDSESYLPEIQQLFKGKSLSFAVPKASE
FT                   MSLLLGDRKGK"
XX
SQ   Sequence 1562 BP; 341 A; 460 C; 387 G; 374 T; 0 other;
     ccagtctccg cgccgcggcg cgctctggca ctggacccgc tatgggcgcc gccgcgtggg        60
     caccgtcgct cttgccgccg cgtgtgtctc tcctgctgct gcttttgccg ctcccggggc       120
     tgcccgtggg ctcctgggat ccggccggtt acctgctcta ctgcccatgc atggggcgtt       180
     ttgggaacca ggctgatcat ttcttgggct ccctggcatt tgcaaagctg ttgaaccgca       240
     ccctggctgt acctccttgg attgagtacc agcatcacaa gcctcctttc accaacgtcc       300
     atgtgtccta ccagaagtac ttcaagctgg agcccctcca ggcctaccat cgagtcatca       360
     gcctggagga cttcatggag aagctggcac ccacccactg gccccctgag aagcgggtgg       420
     catactgctt tgaggtggca gcccagcgaa gtcctgataa gaagacatgc cccatgaagg       480
     aaggaaatcc ctttggccca ttttgggatc agtttcatgt gagtttcaac aagtccgagc       540
     tttttgcagg catttccttc agtgcctcct acaaagacca gtggatccag agattttccc       600
     cagaggaaca tccagtgctt gccctgcctg gtgcccctgc ccagttccct gtcctggagg       660
     agcacaggcc cctccagaag tacatggtgt ggtcagacga gatggtgagg acaggggagg       720
     cccagatcca cgcccacctc atccggccct acgtgggcat tcacctgcgc attggctctg       780
     actggaaaaa cgcgtgtgcc atgctgaaag atggaaccgc tggcgcccac ttcatggcct       840
     ccccacaatg cgtgggctac agccgccaca ccaccgcccc gcttaccatg accatgtgcc       900
     tccctgacct gaaggaaatt aggcgcgctc tgaagctctg ggtgacagcg ctgaacgccc       960
     aatcggtcta cattgccacc gactctgaga gttacctgcc cgagatccag cagctcttca      1020
     aagggaagag cctgagtttt gctgttccga aggcatcaga gatgtccttg ctgctcgggg      1080
     acaggaaagg gaagtgatgg accttcatca cactacagcc ttttcagatt gacttctttc      1140
     ccctgctgct gctgctgctg tcgcttcagt tgtgtctgac tctgtgcgac cccagagatg      1200
     gcagaccacc aggcttcccc atccctggga ttctccaggc aagaacactg gagcaggttg      1260
     ccatttcctt ctcccgtgca tgaaagtgaa aagtaaaagt gaagtcgctc agtcgtgtcc      1320
     aactcttcga gaccccatgg actgcagcct accctagtag tacacattta agtcttctcg      1380
     tggcttttca tgggttgata gctcatttct ttttagcaat gaataataat attccattat      1440
     ctggatattc cagtttattt atccattcac ctactgaatg acatcttcag tgtggcttcc      1500
     gagtttggta attattaata aagctgctat aaatatcaaa aaaaaaaaaa aaaaaaaaaa      1560
     aa                                                                     1562
//