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EBI DbfetchID BC125909; SV 1; linear; mRNA; STD; VRT; 5274 BP. XX AC BC125909; XX DT 03-NOV-2006 (Rel. 89, Created) DT 12-JAN-2007 (Rel. 90, Last updated, Version 3) XX DE Danio rerio zgc:153912, mRNA (cDNA clone MGC:153912 IMAGE:7042085), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-5274 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-5274 RG NIH MGC Project RA ; RT ; RL Submitted (19-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998J0314799Q. DR ImaGenes; IRAKp961B04286Q. DR ImaGenes; IRBOp991G1180D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 286 Row: b Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 116487514. XX FH Key Location/Qualifiers FH FT source 1..5274 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_10" FT /clone="MGC:153912 IMAGE:7042085" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..5274 FT /gene="zgc:153912" FT CDS 381..1955 FT /codon_start=1 FT /gene="zgc:153912" FT /product="zgc:153912" FT /db_xref="GOA:A0JMK2" FT /db_xref="InterPro:IPR004139" FT /db_xref="UniProtKB/TrEMBL:A0JMK2" FT /db_xref="ZFIN:ZDB-GENE-061103-589" FT /protein_id="AAI25910.1" FT /translation="MVRKKGSLILCGAFLFVAWNALLLLFLWGRPPIGRLGEGGGAEPG FT AGEEWGAGKSKVGGANGLAGEVIRLAEEVESELETQKKLLKQIQSHRELWEQRKELEKR FT ESEDTKDEKIDVEPKKPRQIPAVHLSHKVVEDAQTVTKKMQTLMVTPPQLVMKEQETDQ FT KNKQMMEDQLGLTTPSPQIIIPILVIACDRVTVKRSLDRLIQYRPSAELYPIIVSQDCG FT HADTARVIGSYGSQITHISQPDLADIPVRPDHRKFQGYYKIARHYRWALNQVFNVFAYS FT TVVIVEDDLEVAPDFFEYFRALYPILRSDPTLWCISAWNDNGRDGLVDPGKAELLYRTD FT FFPGLGWMLLKEVWAELEPKWPKAFWDDWMRHPEQRKNRSCIRPEISRTITFGRKGVSL FT GQFFDQYLRYIKLNTEFVPFTKHDLSYLVREKYDVSFEKDVYSAPLVKVEELQHGGSLK FT GSGPFRVQYSSRDSFKVLARNLGVMDDLKSGVPRAGYRGVVSFISRGRRIYLAPPEGWT FT KYDVSWS" XX SQ Sequence 5274 BP; 1561 A; 1025 C; 1182 G; 1506 T; 0 other; gtcaaatgaa gacctctgtc aggacattcc tgcacactcc gccgttagaa taagcatccg 60 aaacgcacgt cctcacctca gcagctcaac cagccgcaga ccttaccgga tgtgaaacac 120 ggagcgggac tgagcgcacg cacatacacg gggagaaaga gagatagaaa tgggcgacag 180 ctgcaggaat ggagagagcc gaatattgac aggcgaccga tgaagatgat gatgatgatg 240 atgaagagtg agaagtgaag gtctcattct gacggtctgc atctcttcag tcacggccat 300 ctcgctgttt aaccccatcc tgtccagaga tgatgaaagc gttgtcctcg ctgcggtccc 360 tcgtgtggtg tcattgggcc atggttcgca agaaaggatc tcttattttg tgcggagctt 420 ttttgtttgt cgcctggaac gccttgctcc tcctcttctt atgggggagg cctcccattg 480 gtcgacttgg ggagggagga ggagccgaac caggggccgg agaagagtgg ggagcaggaa 540 agtcaaaagt gggtggagct aacggattgg ccggtgaagt gatcagattg gctgaagaag 600 tagaatcgga actggagact caaaagaagc tcctcaaaca aattcaaagc cacagagaac 660 tatgggaaca gcggaaggaa ctggaaaaga gagaatcgga ggacacgaag gatgaaaaga 720 tcgacgtaga gcctaaaaag cctaggcaga ttcctgcagt acatctaagt cataaagtgg 780 tagaagatgc acaaactgtt acgaaaaaaa tgcagacttt aatggtcacg ccgcctcagc 840 tggtcatgaa ggagcaggaa acagaccaaa agaacaagca aatgatggaa gatcaactag 900 gccttactac accaagccct caaatcatta tcccaattct ggtcattgcc tgtgatagag 960 taactgtgaa gaggagttta gataggttga tacagtatcg tccttctgct gagctttacc 1020 caattattgt cagtcaggac tgtggtcacg ctgatacggc cagggtgatt ggctcctatg 1080 gcagtcaaat aacccacatt agccaaccgg atcttgcgga cattccagta agacccgatc 1140 acaggaagtt ccagggttac tacaagatcg ccaggcacta ccgttgggcc ctgaaccaag 1200 tgttcaatgt ctttgcctac tccacagtgg ttattgtgga ggatgacctg gaggttgccc 1260 ctgacttttt tgagtatttc cgtgcgctgt accccatctt gcgatcagac ccaactctgt 1320 ggtgcatatc cgcttggaac gataatggac gggacggtct ggttgaccca ggcaaggctg 1380 aactccttta ccggacagat ttctttcccg gtcttggatg gatgcttttg aaggaagtct 1440 gggcagagtt ggagcccaag tggcccaagg cgttctggga tgactggatg cgacacccag 1500 agcagcggaa aaaccgctca tgcattcgcc ctgagatctc caggactata accttcggcc 1560 ggaaaggcgt cagtttgggt cagttttttg accagtatct gcgctacatc aaactcaata 1620 ctgaatttgt gcctttcacg aaacatgact tgtcctactt ggtcagggag aagtacgacg 1680 tatcctttga aaaagacgtt tatagcgccc ccttggtgaa ggtggaggaa ctacagcacg 1740 gtggaagctt gaaaggctcg ggaccgtttc gagttcaata ttccagcaga gacagtttta 1800 aagtgctggc ccgcaattta ggagttatgg atgacttgaa gtcaggggtt ccccgtgctg 1860 gatacagggg cgtagtcagc tttatttctc gtggacgacg aatttatctg gctccccctg 1920 agggctggac taaatatgac gttagctgga gctgaggaga tcacaaaaga cccgaaggag 1980 aaaacgtaca actattatta caagtaacga aggagagaga cgccctctca aaccaaagaa 2040 aacaagagac agggtgtgaa agggagtaaa taacagctgt tttgtgaagg aggaacaccc 2100 aggcattctg ggaactgcac aaaaggaagt gcgtcgtatt ttgcgcagca atcatgcaac 2160 aatcttccct cagtgaaagt ggtagttaag ctgcaaacaa ctccaatgca gaatcacata 2220 ttctgatatg gagatgaata atcagattcc tcttattatt attattatta tttgagctta 2280 ctgagcgttg tgcgggatca acatcaatgc aaaagacatt ttatttaatc ctggaggaat 2340 ctcacgaaaa gatgttttaa agacagaaaa tgtaaaaaat atgtaagaga aatggggacc 2400 atatgctgca gaatttcaaa tcaagcttga tttttgggac catttttaat gatattattt 2460 taatatgcgc aattttactc gattttgaat tcatttttgt ttctgttttg tttgtttatg 2520 ccctattaca gcgtccttct tacagtgtaa ctatacactt aaatactgag taatattaat 2580 taactacatg tacttaatgg ttagggtttg attaagggtt gggttgaagg atagttgtat 2640 gtaattactc ggggtgtaac ggatcacggt tgatcacaac caacagttcg gaacgcacat 2700 gacccgcgga ttaataactt ttaaaacttg taggttaatc caacatttat aacgattgca 2760 gaaagatctc tcgtgtcaat caaatcatgt gtatgaaagc attttggctt ccttgtaaaa 2820 cataatgatg acagaaaaag ttgtggtggg accttaatgc ttacttacag taggttatta 2880 attaaaggtg ttttctgtca ctgcttgtgt agcctgcatt aatgcattca gtaaaaagct 2940 gaacgattaa acattaaaag atcatgatct caattcaaac ccacatttaa atctgcgttt 3000 gatcaagaga gattcaaggc tcgtacacac cgagattctt tttgtttgtg tttattatta 3060 gcattttgga gctgtttttc cgcattcaaa cccaagcaat ttttcactgg tgtcaagcag 3120 aagagtatgc aaaatcactt cttgacgtta ggtggcgcta cacaacttta aacttttgat 3180 acctgcttgt aacatcgaag aataagacag aaagttaaca cacttgttgt taaagttact 3240 ggtgattcga acaagcatgg atggttctag cagctccagc tctagcgatg aagaaattat 3300 tattgttcac cagtgcaatc agcagctgaa aactgaatac gtgagcagaa tgcgtcccgg 3360 tgtgaatagg cctcaagttt ttacactttt tcagttagtt acaaacaatt acataaccca 3420 gaagtactgg gagaacagtt tatagttcag atgtaaacac tgatgtttat ggtaaagttt 3480 aaatcacagt ttaatggaac ttgacgctgg tgaatgttgt acagtacatt ttgttaccaa 3540 tgggtggcga caaacaacct aaaattatgt cactgaatag aggaattacc aacctacgtc 3600 acacgggttc ccttttgcaa aaaaagaccg gttgcagtag caaaacattc agcaaaaaca 3660 tttacatatg gtgaatttaa ctgcagacac tgaatgcttg gaatgaaatg taaagatata 3720 agttcacata tcctgccgta caggtgcagt tcgctgtcag aatgcagtag ttttgcttga 3780 tgattaccca ggccttgtat agctccgcct tttttcctgg tctttggctt ggcagaacct 3840 cggtttatag aacattattt cttacacatg acaacacaga acaaaactgt tggcgtccaa 3900 agacttgtag gccttcaact tctcttgtaa aatcacttgg cgtttcaata agatagttat 3960 atattttggg ctggatgctt ggccgttttg tcttatccaa tattcattgg gagggtgcta 4020 tcgcaaatgg acctgtcaga cgaacgccgc tcacttcaac gttaattttg ccaaatcact 4080 gtgcatacca ctgggtgacg agctgttata atacactgaa agcgttatgt aaataatata 4140 catataatag gtaatcaata taacatttct gagacaacaa caaactctgt accgcatcgg 4200 atgtcattcc ctcgctgcaa atgctagcgc tcccgttttt tttttctgca acctcactgc 4260 gcacccatcc agaatgttta caaaccagta attcatctat aggtttgtga tgtgtgatcc 4320 gttacaccac taattattac tcataattta ttgtttttac catagtaagt acgtaaaacg 4380 tataagaagg acctttttct cagtgattat aactggaatt attgtttatt atcaccatga 4440 tatatacaaa agaataataa tactatatta ttaagtttca tgagattcag cctttaaaga 4500 gtgttaaagg ccctactgaa gccctttttg caggttttat tagttcctga catcattata 4560 aatgaagatt gtgtataatt ggtgtctgat ttgatcaacg cacccatgaa agcgcagact 4620 tgtttgtttg acttttttta tgtagcactt gaatcaatga agttcaagct tgtgccagaa 4680 atgatcagag gctcatgtaa ctgacatacc aaaactctgg acgacatttc ttctgtgcca 4740 ttctgttgaa gtactgtact tgaacctttt atttggactg ctcttcctgg cccgggagag 4800 atgtcatttg ctttttgtat aggtttgttg caaaaccaga ggtcatagaa attgcttttt 4860 atgtttttac ggatgaaatg aatggattgc agtgggccag agatgaagta tactgtatct 4920 gaagtgttcg agaaagagag atgatctgat attaatgcaa atgcagtatg aagaagtgtg 4980 aaaccactgc ctgacatgtt tataacttta atactttgag aataaaacag actattttga 5040 tatttgacaa tatatgctac tttttcctgt ctttttttag gtttgtaaat gtgtcctttt 5100 tatgtcacgt cgttgttaaa ctgaaacctt atctgggcac ttccttttgt gtcatgttgg 5160 tttgttaaac tgaaatctta tctggcgact tcctttcaga gatcttttat taaaaccccc 5220 acatcagcag tgatgcaggc gccattgtga aaaaaaaaaa aaaaaaaaaa aaaa 5274 // |
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