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EBI DbfetchID BC125533; SV 1; linear; mRNA; STD; MUS; 2512 BP. XX AC BC125533; XX DT 15-OCT-2006 (Rel. 89, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 4) XX DE Mus musculus mannoside acetylglucosaminyltransferase 5, mRNA (cDNA clone DE MGC:159236 IMAGE:40130048), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-2512 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2512 RG NIH MGC Project RA ; RT ; RL Submitted (12-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSMUSG00000036155; Mus_musculus. DR Ensembl-Tr; ENSMUST00000038361; Mus_musculus. DR ImaGenes; IRCKp5014K174Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRCK Plate: 4 Row: K Column: 17. XX FH Key Location/Qualifiers FH FT source 1..2512 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_390" FT /clone="MGC:159236 IMAGE:40130048" FT /tissue_type="Brain,thymus,testicle,kidney,spleen,liver, FT heart,lung,ovary,embryo - PCR rescued clones" FT /note="Vector: pCR4-TOPO with reversed insert; Clone FT identification sequence tag: CTAATCCG" FT /db_xref="taxon:10090" FT gene 1..2512 FT /gene="Mgat5" FT /note="synonym: GlcNAc-TV" FT misc_feature 1..2512 FT /gene="Mgat5" FT /note="This cDNA sequence aligns to the mouse C57BL/6J FT genome (build 36) without differences" FT CDS 43..2265 FT /codon_start=1 FT /gene="Mgat5" FT /product="mannoside acetylglucosaminyltransferase 5" FT /db_xref="GOA:Q059T5" FT /db_xref="MGI:894701" FT /db_xref="UniProtKB/TrEMBL:Q059T5" FT /protein_id="AAI25534.1" FT /translation="MAFFSPWKLSSQKLGFFLVTFGFIWGMMLLHFTIQQRTQPESSSM FT LREQILDLSKRYIKALAEENRDVVDGPYAGVMTAYDLKKTLAVLLDNILQRIGKLESKV FT DNLVNGTGANSTNSTTAVPSLVSLEKINVADIINGVQEKCVLPPMDGYPHCEGKIKWMK FT DMWRSDPCYADYGVDGTSCSFFIYLSEVENWCPRLPWRAKNPYEEADHNSLAEIRTDFN FT ILYGMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKILVHLGLLTKESG FT FKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKKVVGNRSGCPTV FT GDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPEFNHASYAQSKGHKTP FT WGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHHINEIKRQNQSLVYGKVDSFW FT KNKKIYLDIIHTYMEVHATVYGSSTKNIPSYVKNHGILSGRDLQFLLRETKLFVGLGFP FT YEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVW FT TVDLNNREEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIEKQDFCHGQVMWPPLS FT ALQVKLAEPGQSCKQVCQESQLICEPSFFQHLNKEKDLLKYKVTCQSSELYKDILVPSF FT YPKSKHCVFQGDLLLFSCAGAHPTHQRICPCRDFIKGQVALCKDCL" XX SQ Sequence 2512 BP; 656 A; 651 C; 648 G; 557 T; 0 other; tgcttgttga gagccaaggg aatggtacat tgctagagag agatggcttt cttttctccc 60 tggaagttgt cctctcagaa gctgggcttt ttcctggtga ctttcggctt catctggggc 120 atgatgcttc tgcacttcac catccagcag cggactcagc ccgagagcag ctccatgtta 180 cgggagcaga tccttgacct cagcaagagg tacattaagg cactggcaga ggagaacagg 240 gacgtggtgg atggccccta cgctggtgtc atgacagcct atgatctgaa gaaaacgctc 300 gccgtcttgc tggataacat cctgcagcgc attggcaagc tcgagtcaaa ggtggacaat 360 ctggtcaacg gcacaggagc gaactccacc aactccacca cggctgtccc cagcttggtg 420 tcgcttgaga aaattaatgt ggcagatatc attaatggag ttcaggaaaa atgtgtattg 480 cctcctatgg atggctaccc ccactgcgag gggaaaatca agtggatgaa ggacatgtgg 540 cgctcggacc cctgctacgc agactatgga gtggacggga cctcctgctc cttttttatt 600 tacctcagtg aggttgaaaa ttggtgtcct cgtttacctt ggagagcaaa aaatccctat 660 gaagaagctg atcataactc attggcggaa atccgtacgg attttaacat tctctacggc 720 atgatgaaga agcacgagga gttccgttgg atgaggcttc ggatccggcg aatggctgac 780 gcgtggatcc aagctatcaa gtctctggcg gagaaacaaa accttgagaa gaggaaacgg 840 aagaaaatcc ttgttcacct ggggctcctg accaaggaat cgggcttcaa gattgcggag 900 acagcattca gcggtggccc tctgggtgaa ctcgttcagt ggagtgactt aatcacatct 960 ctgtacctgc tgggccatga catccggatc tcggcctcac tggctgagct caaggagata 1020 atgaagaagg ttgttggaaa ccggtctggc tgtccaactg taggagacag aatcgttgag 1080 ctgatttata tcgatattgt gggacttgct caatttaaga aaacactagg gccatcctgg 1140 gttcattacc agtgcatgct ccgggtgcta gactcctttg gaacagaacc tgagttcaat 1200 catgcgagct atgcccagtc aaaaggccac aagaccccct ggggaaagtg gaatctgaac 1260 ccgcagcagt tttacaccat gttccctcat accccagaca acagctttct gggcttcgtg 1320 gtggagcagc acctgaactc cagcgacatt caccacatca acgagatcaa aaggcagaac 1380 cagtcccttg tgtatggcaa agtggatagt ttctggaaga ataagaaaat ctacctggat 1440 atcattcaca cgtacatgga agtgcacgcc actgtttatg gctccagtac caagaacatt 1500 cccagttacg tgaaaaacca tggcattctc agtggacgtg acctgcagtt tcttctccgg 1560 gaaaccaagc tgttcgttgg gctcggattc ccttatgaag gcccagctcc cctggaggcc 1620 atcgcgaatg gatgtgcttt cctgaacccc aagttcaacc ctcccaaaag cagcaaaaac 1680 acagacttct tcattggcaa gccaacactg agagagctga catcccagca tccttacgca 1740 gaagtcttca tcggccggcc acacgtctgg actgtggatc tcaataaccg agaggaagta 1800 gaagatgcag taaaagccat cttaaaccag aagattgagc cgtatatgcc atatgagttc 1860 acatgtgaag gcatgctgca gagaatcaac gctttcattg aaaaacagga cttctgccat 1920 ggccaagtga tgtggccgcc cctcagcgcc ctgcaggtga agctggctga gccagggcag 1980 tcctgcaaac aggtgtgcca ggagagccag ctcatctgcg agccttcctt ctttcaacac 2040 ctcaacaagg aaaaggacct gctgaagtat aaggtgacct gccaaagctc agaactgtac 2100 aaggacatcc tggtgccctc cttctacccc aagagcaagc actgtgtgtt ccaaggggac 2160 ctcctgctct tcagttgtgc cggagcccac cccacacacc agcggatctg cccctgccgg 2220 gacttcatca agggccaagt ggccctctgc aaagactgcc tatagcatcg ctgccctgaa 2280 ttaactcaga cgggaaagac gtggctccac tgggcagggc caaggggcac aaagacattc 2340 agggactctg accagagcct gagatctttg gtccagggct tgagtttagt accgctccag 2400 ccacagccag tgcatcccag tttacaccaa aaccacaagg gaacaggtta gaacaggaac 2460 ctgggttctc ctcaatgtaa ggaatgtcct ctctgtctgg gagatcgagc ga 2512 // |
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