EBI Dbfetch

ID   BC125489; SV 1; linear; mRNA; STD; MUS; 3072 BP.
XX
AC   BC125489;
XX
DT   15-OCT-2006 (Rel. 89, Created)
DT   24-SEP-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Mus musculus like-glycosyltransferase, mRNA (cDNA clone MGC:159192
DE   IMAGE:40130004), complete cds.
XX
KW   MGC.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
XX
RN   [1]
RP   1-3072
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-3072
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (12-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   Ensembl-Gn; ENSMUSG00000004383; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000004497; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000119826; Mus_musculus.
DR   ImaGenes; IRCKp5014I214Q.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Ambion
CC   cDNA Library Preparation: British Columbia Cancer Research Center
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRCK Plate: 4 Row: I Column: 21.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3072
FT                   /organism="Mus musculus"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_386"
FT                   /clone="MGC:159192 IMAGE:40130004"
FT                   /tissue_type="Thymus, PCR rescued clones"
FT                   /note="Vector: pCR4-TOPO with reversed insert; Clone
FT                   identification sequence tag: CGGACACC"
FT                   /db_xref="taxon:10090"
FT   gene            1..3072
FT                   /gene="Large"
FT                   /note="synonyms: froggy, Gyltl1a, mKIAA0609, BPFD#36"
FT   CDS             140..2410
FT                   /codon_start=1
FT                   /gene="Large"
FT                   /product="like-glycosyltransferase"
FT                   /db_xref="GOA:Q059X9"
FT                   /db_xref="InterPro:IPR002495"
FT                   /db_xref="MGI:1342270"
FT                   /db_xref="UniProtKB/TrEMBL:Q059X9"
FT                   /protein_id="AAI25490.1"
FT                   /translation="MLGICRGRRKFLAASLTLLCIPAITWIYLFAGSFEDGKPVSLSPL
FT                   ESQAHSPRYTASSQRERESLEVRVREVEEENRALRRQLSLAQGQSPAHHRGNHSKTYSM
FT                   EEGTGDSENLRAGIVAGNSSECGQQPAVEKCETIHVAIVCAGYNASRDVVTLVKSVLFH
FT                   RRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNADELKSEVSWIPNKHYSGIYGL
FT                   MKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNL
FT                   WKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNA
FT                   VIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRN
FT                   LYLTFLEYDGNLLRRELFGCPSETDVNNENLQKQLSELDEDDLCYEFRRERFTVHRTHL
FT                   YFLHYEFEPSADNTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYA
FT                   QGSEVLMSRQNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYL
FT                   RKSVIQLDLANTKKAMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHA
FT                   PTNFAKWRTATTPYQVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDAQEYE
FT                   FTVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAALKYLTAE
FT                   NNS"
XX
SQ   Sequence 3072 BP; 788 A; 777 C; 761 G; 746 T; 0 other;
     accacgcggt tcagctcttt cggagtgtac ctctgcctgg atgtagtcaa ggccaagaaa        60
     gtattatgag ggatgctgag gaattcttgc tctgcacaga gacaccacat tgaaattaga       120
     gattggcact tctgagagga tgctgggaat ctgcagaggg agaaggaaat tcctggctgc       180
     ctctttgact ctactctgca taccagccat cacctggatt tacttgtttg ctgggagctt       240
     tgaagatggg aaacctgtgt ctctgtctcc cctggagtcc caagcccaca gtccccggta       300
     cacagcctcc agccaacggg agcgggagag cctggaagtg cgtgttcgag aagttgagga       360
     ggaaaaccgt gctctgcgca ggcagctcag cctggcccag ggtcagagcc ctgctcacca       420
     ccgtgggaac cactccaaga cctactccat ggaggagggg acaggggaca gtgagaatct       480
     gcgagctggc attgtggcag gtaacagctc tgagtgtggg cagcagccag ctgtggaaaa       540
     gtgtgagacc atccatgtgg ccatcgtctg tgccggatac aatgccagca gggacgttgt       600
     caccctggtg aaatctgtcc tctttcatag gcggaaccct ctgcacttcc acctcattgc       660
     tgattctatt gctgagcaga tcctggctac actcttccag acctggatgg tacctgcagt       720
     gcgagtagac ttctataatg ctgatgagct caagtctgaa gtgtcctgga ttcccaacaa       780
     acattactct ggaatttatg gcctgatgaa gctggttctg accaaaactc tgcctgccaa       840
     cctggagaga gtcattgtcc tagacaccga catcaccttt gcaacagaca ttgcagagct       900
     gtgggccgtg ttccataagt tcaaagggca acaggtcctg ggcttggtag agaaccagag       960
     tgactggtat cttggaaatc tctggaaaaa ccaccgtcca tggccagctc ttggaagggg      1020
     ctataacaca ggagtcatac tactgcttct ggacaagctt cggaagatga aatgggagca      1080
     gatgtggaga ctgacagcag agagggaact catgggcatg ttgtctacat ccttggctga      1140
     ccaggatatt ttcaatgctg ttatcaaaca aaaccccttt ctggtgtatc agcttccctg      1200
     cttctggaat gtgcagctgt cagaccacac ccgctctgag cagtgctaca gagatgtgtc      1260
     tgatttaaag gtcatccact ggaactcccc caagaagctc cgtgtgaaga acaaacatgt      1320
     ggaattcttc cgcaacctct acctgacctt cttggagtat gatggcaacc tcctgcggcg      1380
     ggagctgttt ggctgcccca gtgagactga tgtcaacaat gaaaatcttc agaagcagct      1440
     gtctgagctg gatgaggatg acttgtgcta tgagttccgg cgagagcgct tcactgtcca      1500
     cagaacccac ctgtacttcc tgcactacga gtttgagcct tctgctgaca acacagacgt      1560
     tacccttgtt gctcagctct ccatggacag actacagatg ctggaggcca tctgtaaaca      1620
     ctgggaggga cccatcagcc tggccctcta cctgtcagat gcagaagccc agcagttcct      1680
     ccgctatgcc cagggatccg aggtgctcat gagccggcag aacgtgggct accacatcgt      1740
     gtacaaggag ggtcagttct atcctgtcaa tcttctgcga aacgtggcta tgaagcacat      1800
     cagcacaccc tacatgttct tatctgacat tgacttcctg cctatgtatg ggctctatga      1860
     gtacctcagg aaatctgtca tccagcttga ccttgccaat accaagaaag caatgattgt      1920
     cccagcattt gaaacgctgc gctacagact ctctttcccc aagtcaaaag cagagctgct      1980
     gtcaatgttg gacatgggga ccctattcac attcaggtat cacgtatgga ctaaaggcca      2040
     tgcacccaca aactttgcca agtggcggac tgccaccaca ccttaccagg ttgagtggga      2100
     ggctgatttt gagccatatg ttgttgtgag acgagactgc cctgagtatg atcggagatt      2160
     tgtgggcttt ggctggaaca aagtggctca catcatggaa ttggatgcac aggagtatga      2220
     gttcaccgtg ttgcccaatg cctacatgat ccacatgccc catgccccta gtttcgacat      2280
     cactaagttc cgttccaaca agcaataccg catctgtctc aaaaccctga aggaagagtt      2340
     tcaacaagac atgtcccgac gatatggctt tgctgccttg aaatatctca cagctgagaa      2400
     caacagctag cactactagg gagagccacc actagggaga gacgtgccac aagggaagaa      2460
     ccacttcctg ctggggccca gcctttgaag acaaaagcca acactgcttt tctttggttt      2520
     gtttcccttt gtctctttgg ccccacaaag ctgctctctt ctgaagtctt ggacagagac      2580
     ccagcccacc atgggtgctt ccaggatggg acatagaaga gtggaagcaa atgaagagtt      2640
     taacatcatc acaaagccac agaccaagtc agggcttctg gatattccca ttgcttttta      2700
     acagttatgg gtcaaacctt agctgttgag aaagtaagag caataaagct tcctacgatg      2760
     gaaatgtatc ctgccaccta gctgggtacc catatggaca gcaacccaag gacccaaaca      2820
     aacatctgga gactctcata tggacattac acatgaggga cctgaaggag ggatgaattg      2880
     gttgtttatt ctcaaagtca ctcttgtttt gttttgagtt gtttgaattt gggggatttt      2940
     gttcattttg atctagaaat ctaagttttt taaaaaatct aatccttaaa gctctgaaag      3000
     aaaaatcaac tccctcgatc aacacccctc agcagcagtg gccctgcaag tcaagcaccc      3060
     gtggaggatg tt                                                          3072
//