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EBI DbfetchID BC124897; SV 1; linear; mRNA; STD; VRT; 2307 BP. XX AC BC124897; XX DT 05-OCT-2006 (Rel. 89, Created) DT 18-OCT-2008 (Rel. 97, Last updated, Version 9) XX DE Xenopus laevis Phosphatidylinositol 4-kinase type 2-alpha, mRNA (cDNA clone DE MGC:154547 IMAGE:8321464), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2307 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2307 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2307 RA Klein S., Gerhard D.S.; RT ; RL Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998I1418048Q. DR ImaGenes; IRAKp961P24287Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 287 Row: p Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 115528665. XX FH Key Location/Qualifiers FH FT source 1..2307 FT /organism="Xenopus laevis" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb10" FT /clone="MGC:154547 IMAGE:8321464" FT /tissue_type="Embryo, neurula stage" FT /note="Vector: pExpress1" FT /db_xref="taxon:8355" FT gene 1..2307 FT /gene="pi4k2a" FT CDS 67..1476 FT /codon_start=1 FT /gene="pi4k2a" FT /product="pi4k2a protein" FT /db_xref="GOA:Q08B31" FT /db_xref="InterPro:IPR018936" FT /db_xref="UniProtKB/Swiss-Prot:Q08B31" FT /protein_id="AAI24898.1" FT /translation="MDETSPLVSPDRDQTEYSYQSQCSPGATVPLSPNGRFSALPGVVV FT RIPGTATSCGSAASGPSPPGSPCDQERQPLLERSQTRAAAAQAEREMNKFPDDPAFAEV FT VKKAEKAIMRDILPERISQGSSGSYFVKDEQGEIIAVFKPKNEEPYGQLNPKWTKWLQK FT LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLDLNIVPRTKVVFLASETFNYSAIDRVKS FT RGKRLALEKVPKVGQRFNRIGLPPKVGSFQIFVKSYKDADYWLRRFEADPLPENTNRQL FT QLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSASARDDWVMVKEPVIKIAAIDNGLA FT FPLKHPDSWRAYPFYWAWLPQAKIQFSQEIKDLILPKISDPNFVKDLEEDLYELFKKDQ FT GFDRGQFRKQIAVMRGQILNLTQAMKDGKSPLQLVQTPPVIVETARSHQKSTSESYTQS FT FQSRKPFFSWW" XX SQ Sequence 2307 BP; 693 A; 508 C; 533 G; 573 T; 0 other; ctgattgtca cctgtcctgg gttagtggtg tccctgtttg tttgtgtgtc acttcgggag 60 gggagaatgg atgagaccag cccgttagta tctccggacc gggaccagac cgaatactct 120 tatcagtctc agtgctctcc cggagccaca gttccgctta gtcccaatgg gcgcttctca 180 gccttaccgg gggtagtagt tcgaataccg ggcacggcta catcatgcgg atcagcggcg 240 tccggaccgt ctcctcctgg ttctccatgt gaccaggaga ggcagcctct gctggaacgt 300 tcccaaaccc gagcagcggc agcccaggcc gaaagagaaa tgaataagtt tcctgatgac 360 cccgcgtttg ctgaggtggt gaagaaggcg gagaaggcca tcatgaggga tattttgccc 420 gagaggatct cccagggatc cagtggcagc tactttgtga aagatgagca gggggaaatc 480 atcgctgtct tcaaacctaa gaatgaagaa ccttatgggc agcttaaccc caagtggact 540 aagtggctgc agaagttgtg ttgcccttgt tgcttcggaa gagactgtct tgttctcaat 600 caaggatatc tctctgaggc aggagccagc ctagttgacc aaaaattaga tctgaatatt 660 gttcctcgaa ccaaggtcgt gtttcttgca agtgaaacat ttaattacag tgccattgac 720 agggtaaaat cacgaggcaa gcgcctggca ttggagaaag tgccaaaagt gggtcagaga 780 tttaatcgaa ttggattgcc tcccaaggtt ggctccttcc agatctttgt aaaaagctac 840 aaagatgcag actattggct tcggagattt gaggctgacc cccttccgga gaataccaac 900 agacaacttc agctacagtt tgagagatta gtggttttgg actacataat cagaaataca 960 gacagaggta atgataactg gttgattaag tatgactgcc ccatggacag tgcaagtgcc 1020 cgggatgact gggtcatggt aaaagagcca gtgattaaaa ttgctgctat cgacaatggt 1080 ttagctttcc ctcttaagca tcctgactcc tggagagcct atccgtttta ctgggcatgg 1140 ttaccacaag ccaaaattca attttcccaa gaaatcaaag atttaattct tccaaagatt 1200 tcagatccaa attttgtcaa agatttggaa gaagacctgt atgagctgtt taagaaagat 1260 caaggatttg acagaggaca gtttcgcaaa cagatagcag ttatgagagg gcagatcctt 1320 aacctgacac aggctatgaa ggatgggaag agccctctgc agctggtcca gaccccgcca 1380 gtcatagtag aaactgcacg gtcgcatcaa aaaagcacca gtgaatctta cacacaaagc 1440 ttccagagca gaaaaccctt cttttcctgg tggtagttaa atgaacaaga tatctgacac 1500 aattaaggac aaaacgaaaa actttcaatg cagggctgta atgaaggtcg ctgggtataa 1560 ccaagcactg gtagtgttca caatgctgac atttcagaag ggaacattct gatactttgg 1620 gctggttggg cactgactta cttccttgga atgtataacc agatatagga agctgcccat 1680 cacagaccaa tgtgcactta aagaaacatt ccaagtgcat gcatgtggca ttagaggaac 1740 actatggaac tgttgggcat gacttagtga cttaaaacca ctaacaaagc tttataaggt 1800 aagatcacag gaatgtaact aatacaggcc tacttcttac acaacatgca ccactgcata 1860 caccttagtg tttatcctat tctcttactg caagctaaac aaaagcgcac tcggactact 1920 tgcacataat ccaattcctg ccaactgttc caataaacat gtactacaat acacagatgt 1980 acaaaatcct agccatgcac gcttgcctag aactattaca ggggttgcta cgagtgcatg 2040 tactacctta ttcaggtact gtatctgggt tggacttact gacaacacaa gcctggaaat 2100 gcgaatcgta agtaactgca tgcactactt ccagtgcaag tgctcaagga agccggtgat 2160 gtgatatcct gcattgtgtt ctgtttacag gcgtatgtgg agaatgcaca catacttaga 2220 tctgctcatt gtccatttgc ttgtacccaa aataaataac ctttaacaac tgaaaaaaaa 2280 aaaaaaaaaa aaaaaaaaaa aaaaaaa 2307 // |
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