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EBI DbfetchID BC124888; SV 1; linear; mRNA; STD; VRT; 1577 BP. XX AC BC124888; XX DT 05-OCT-2006 (Rel. 89, Created) DT 18-OCT-2008 (Rel. 97, Last updated, Version 9) XX DE Xenopus laevis Hydroxyacid-oxoacid transhydrogenase, mitochondrial, mRNA DE (cDNA clone MGC:154514 IMAGE:8319606), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1577 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1577 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1577 RA Klein S., Gerhard D.S.; RT ; RL Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998L0418043Q. DR ImaGenes; IRAKp961M22287Q. DR ImaGenes; IRBHp990A0292D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 287 Row: m Column: 22 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 115527870. XX FH Key Location/Qualifiers FH FT source 1..1577 FT /organism="Xenopus laevis" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb10" FT /clone="MGC:154514 IMAGE:8319606" FT /tissue_type="Embryo, neurula stage" FT /note="Vector: pExpress1" FT /db_xref="taxon:8355" FT gene 1..1577 FT /gene="adhfe1" FT CDS 80..1471 FT /codon_start=1 FT /gene="adhfe1" FT /product="adhfe1 protein" FT /db_xref="GOA:Q08B39" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/Swiss-Prot:Q08B39" FT /protein_id="AAI24889.1" FT /translation="MAAGRDGVIHLLRQLQRASCRCPAHSHTYSQAPATARTTDYAFEM FT AVSSIRYGENVTQEIGMDLQNWGTRNVCVMTDRNLSELSPVKAVLNSLVKNGINFKLYD FT SVRVEPTDKSFMDAIEFAKKGQFDAFVAVGGGSVIDTCKAANLYSSSPDSDFLDYVNPP FT IGKGKAVTVPLKPLIAVPTTSGTGSETTGIAIFDYEELKAKTGIASRAIKPTLGLIDPA FT HTLSMPERVVANSGFDVLCHSLESYTALPYNMRSPCPTNPINRPAYQGSNPISDVWAKH FT ALRIVAKFLKRAVRNPDDREARFAMHLASSFAGVGFGNAGVHLCHGMSYPIAGHVKTYR FT AKDYKVDHPLVPHGLSVVLTSPAVFSFTGLMCPERHLEAAEILGADLRTAKIKDAGLIL FT ADTLRKFLYDLNVDDGLAAVGYTAEDIPALVKGTLPQERVTKLSPRAHSEEELAALFEA FT SMKLY" XX SQ Sequence 1577 BP; 461 A; 339 C; 364 G; 413 T; 0 other; cagacaaggg agcactgtaa caggcagtgt gagcacaatc cgtgtataat cggttcctat 60 acagaggtgt tttatcgcga tggctgccgg acgcgatgga gtgatccatt tattgagaca 120 actgcagcga gcatcatgca ggtgtccggc tcattctcac acttattctc aagctccagc 180 tactgcaaga acaacagact atgcatttga gatggcagtc tcaagcattc gatatggaga 240 aaatgttacc caggaaattg gcatggactt gcagaattgg ggaaccagga atgtctgtgt 300 gatgactgat aggaaccttt cagagctctc ccctgtaaag gctgtattaa attcactagt 360 aaagaatggc atcaacttca aattatatga cagtgttcgg gtggaaccaa ccgataaaag 420 ctttatggat gctattgagt ttgctaagaa aggacagttt gatgcctttg ttgctgttgg 480 aggaggttct gtaattgaca catgcaaagc tgccaacttg tattcttcca gccctgattc 540 tgatttcctg gattatgtca accctccaat agggaaaggc aaagcagtga ctgtgcctct 600 taaaccactt attgcagtcc caaccacatc tggaaccgga agcgagacaa caggaattgc 660 tatattcgac tatgaagaac taaaagccaa aacaggtatt gcatctagag ctattaagcc 720 cactttaggt ttgattgacc cagcacacac actttctatg cctgaaagag tagttgcaaa 780 cagcggtttt gatgtattgt gccattccct tgagtcctac actgcccttc catataacat 840 gcgcagcccc tgtcctacca acccaattaa ccgtccagct tatcagggga gcaaccctat 900 tagtgatgtt tgggctaaac acgccttgag gatcgtagcc aagtttttaa agagagccgt 960 aaggaatccc gatgaccgtg aagctcggtt cgccatgcac ttggcaagtt catttgcagg 1020 agtaggcttt ggaaatgctg gggtacatct ttgccacgga atgtcgtacc ctattgcagg 1080 acatgtgaag acttacagag ccaaagatta caaagtggat catccattag tgccccatgg 1140 cctttctgtt gttctcacat ctccggcagt attttcattc acaggattaa tgtgtcctga 1200 gcgacacctg gaggcagcag aaattctggg agctgacctc cggactgcca aaatcaaaga 1260 tgctgggctt atcctggcag acacgctacg gaaatttctg tatgacctga atgttgatga 1320 tggtttggca gctgtaggat atactgctga ggatataccg gccttggtga aaggaacttt 1380 gccccaggaa cgagtaacaa agctgtctcc tcgagcacat tctgaagagg aactagctgc 1440 gttgtttgag gcttcaatga aactttattg ataatgtgca cattggttgt cgatccattc 1500 aagaacatgc aagtaaaaat attacctcta ataaaattgg ggtcttgtaa aaaaaaaaaa 1560 aaaaaaaaaa aaaaaaa 1577 // |
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