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EBI DbfetchID BC124544; SV 1; linear; mRNA; STD; VRT; 1854 BP. XX AC BC124544; XX DT 20-OCT-2006 (Rel. 89, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 2) XX DE Danio rerio pyrroline-5-carboxylate reductase-like, mRNA (cDNA clone DE IMAGE:8356713), partial cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1854 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1854 RG NIH MGC Project RA ; RT ; RL Submitted (22-SEP-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000015236; Danio_rerio. DR Ensembl-Tr; ENSDART00000021631; Danio_rerio. DR ImaGenes; IMAGp998F0718139Q. DR ImaGenes; IRAKp961P06286Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Cassandra Belair, Dr. Leonard Zon CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 286 Row: p Column: 6 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1854 FT /organism="Danio rerio" FT /lab_host="T1-resistant E.coli" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_29" FT /clone="IMAGE:8356713" FT /tissue_type="Whole body, 30-day juvenile, WIK strain, FT probable males" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene <1..1854 FT /gene="pycrl" FT CDS <1..844 FT /codon_start=2 FT /gene="pycrl" FT /product="pycrl protein" FT /db_xref="GOA:Q5SPD7" FT /db_xref="InterPro:IPR000304" FT /db_xref="UniProtKB/Swiss-Prot:Q5SPD7" FT /db_xref="ZFIN:ZDB-GENE-041014-244" FT /protein_id="AAI24545.1" FT /translation="KTSDSPDVFQIKIGFIGAGNMAFGVAQGIIASGKVPPSNIIISAP FT SMNNLPRFKEKGVSVTHSNHEVVGGSRLIFLAVKPHIIPQVLKEISQEVTKEHIIVSMA FT AGITIATLEELLPAGTHVIRIMPNLPCMLLEGALLLSCGSHAGEQEETLLKTLLGPCGL FT VEFGPESWIDAHVGLSGSGVAFVYVFAEALADGAVKMGMPSTLARRIAAQTILGAGVLL FT RDSGKLPAELKAEVCTPGGTTIHGIHALEKGGFRAAAIGAVEAASERARELGNKQKKN" XX SQ Sequence 1854 BP; 495 A; 393 C; 453 G; 513 T; 0 other; caagaccagc gattcacccg atgtgtttca gattaagatc ggattcatcg gagcgggaaa 60 catggcgttt ggcgtcgcgc agggaatcat cgcctcaggg aaggttccac caagtaatat 120 aattattagt gctccatcca tgaacaacct tcctcgcttt aaggagaaag gtgtttcagt 180 cactcattcc aatcatgagg ttgttggagg ctctcgtttg atctttctgg ctgtcaaacc 240 tcacatcatt ccacaagtcc taaaagaaat ctcacaggaa gtcaccaagg aacacatcat 300 cgtttccatg gctgccggaa tcactatagc aacactcgag gagctgttgc ctgctggaac 360 acatgtaatc cgtataatgc cgaatcttcc ctgtatgctc ctggagggtg cattactcct 420 gtcctgcggc tcccatgcgg gagagcagga ggagaccctc ctgaagacgc ttcttggccc 480 ctgtgggttg gtggagtttg gacccgagtc ctggatcgac gcccacgtgg gcttgagtgg 540 gagcggcgtc gcattcgtgt atgtgttcgc ggaggcgctg gcagatggtg ctgttaagat 600 ggggatgccc agcactctgg ctcgacgcat tgcagcacag acaatactgg gtgctggagt 660 gttactgcgg gactccggga agctgccggc ggagctgaag gccgaggttt gcactcctgg 720 aggaaccacc attcacggca tccacgcgct ggagaaagga ggattcagag cggctgcgat 780 tggcgcggtg gaggcggcgt cagaaagagc tcgagaactt ggaaacaagc agaagaagaa 840 ctgaatcatc ctacaggaga gataaagctg cagttaaagc aggggtgtcc agactctgtc 900 ctggagggcc ggtgtcctgc atagtttagc tccaacttcc ttcaacaggc atacctgcca 960 acatttgggt tattgggtgg ctgaactgaa gagcggggag cgggtatgga gatggttgcg 1020 cgttgggttt gatacgcaag gggtctgtac caaaaagcag aacaatacgg gagatgggtc 1080 tgaaatacgg gagactcccg ggaaaaacag gagtgttggc aggtatgtcc acacatctgc 1140 ctggaagttt ctagtttacc tagtaagagc ttgattagtt gcttctggtg tgtttaattg 1200 gggttggagg taaaatatgc aggacaccat ctctccagag ccgaatttgg gcacccctga 1260 attaaagggt cagttcagcc taatatgaaa accaccacgt tatttactca ccctcaagtc 1320 atgttgggtt taaatgcctg ttttgagtca aaccaacaca atcggagtag ttttacattt 1380 tatcttggct cttcatcttc ttctttatgg ttcttctttt ccctgggttt tatttaccac 1440 aaattaatgc actgactatg cacttttcaa aataaaagtc acaacaccat tatactgcat 1500 atatagtggt gttgatagac ttttattttg aagggtacat atttagtgca taggtttgtg 1560 gtcaaactaa cccatacccc accagggggt taatttatgt ctaataaaac caattcatgt 1620 gttttcataa aataaatatt tataattttt taatcattaa attataaact caataccaaa 1680 ccccctgaat cttctttttc ttcttgattt atgtagtttt attattgttt tgcggtttaa 1740 attactgcca cctactagaa ttggatttgg atttggaaat atgctgtatt atttattaaa 1800 aaataaattg cagtcactcc ctttcctttg aaaaaaaaaa aaaaaaaaaa aaaa 1854 // |
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