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EBI DbfetchID BC123510; SV 1; linear; mRNA; STD; MAM; 1693 BP. XX AC BC123510; XX DT 23-SEP-2006 (Rel. 89, Created) DT 07-MAR-2007 (Rel. 90, Last updated, Version 3) XX DE Bos taurus pyrroline-5-carboxylate reductase 1, mRNA (cDNA clone MGC:139999 DE IMAGE:8285861), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-1693 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (20-SEP-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000000042; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000017992; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000000046; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000023937; Bos_taurus. DR ImaGenes; IMAGp998B0317956Q. DR ImaGenes; IRAKp961N04269Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E, CC Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M, CC Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson CC R, Siddiqui A, Holt R, Jones SJ, Marra MA CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 269 Row: n Column: 4. XX FH Key Location/Qualifiers FH FT source 1..1693 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-30" FT /clone="MGC:139999 IMAGE:8285861" FT /tissue_type="Fetal muscle , female fetus 6 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..1693 FT /gene="PYCR1" FT CDS 55..1017 FT /codon_start=1 FT /gene="PYCR1" FT /product="pyrroline-5-carboxylate reductase 1" FT /db_xref="GOA:Q58DT4" FT /db_xref="InterPro:IPR000304" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q58DT4" FT /protein_id="AAI23511.1" FT /translation="MSVGFIGAGQLAFALAKGFTAAGVVAAHKIMASSPDMDLATVSAL FT RKMGVNLTHHNKETVQHSDVLFLAVKPHIIPFILDEIAANIEARHIVVSCAAGVTISSI FT EKKLTAFQPAPKVIRCMTNTPVVVREGATVYATGTHAQVEDGRLLEQLMSSVGFCTEVE FT EDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQ FT HPGQLKDNVCSPGGATIHALHVLESGGFRSLLIKAVEASCTRTRELQSMADQEKVSPAA FT IKKTILDKVKLDSPPGTSLAPSGHSKLLPRSMAPAGKQD" XX SQ Sequence 1693 BP; 368 A; 549 C; 464 G; 312 T; 0 other; cgtacgggag ccggtgccag ctgagagggc ggtgggcgca gacctccaga cactatgagc 60 gtgggcttca tcggggctgg ccagttggcc tttgcgctgg ccaagggctt cacagcagca 120 ggtgttgttg ctgcccacaa gataatggcc agttctccag acatggacct ggccaccgtt 180 tctgccctca ggaagatggg ggtgaacctc acgcatcaca acaaggagac cgtgcagcac 240 agcgacgtgc tcttcctggc cgtgaagcca cacatcatcc ccttcatcct ggatgagatc 300 gccgccaaca ttgaggctcg gcacatcgtg gtgtcctgtg cagccggtgt caccatcagc 360 tccattgaga agaagctgac ggcgttccag ccagctccca aagtcatccg ctgcatgacc 420 aacacgccgg tcgtggtgcg ggaaggggcc acagtgtatg ccacaggcac ccatgcccag 480 gtggaggacg gcaggctcct ggagcagctc atgagcagcg tgggcttctg cacggaggtg 540 gaggaggacc tgattgatgc cgtcacaggg ctcagtggca gtggcccagc ctatgcattc 600 acagccctgg acgcactggc tgatggaggt gtgaagatgg gacttccaag acgcctggca 660 gtccgcctcg gggcccaggc tctgctgggg gctgccaaga tgctactgga ctctgaacag 720 cacccaggcc aactcaagga caacgtctgc tcaccaggcg gggccacgat ccatgcgttg 780 cacgtgctgg agagtggggg ctttcgctcg ctgctcatca aggccgtgga ggcctcctgc 840 acccgcacac gagagctgca gtccatggcc gaccaggaga aggtctcacc agctgccatc 900 aagaaaacca tcctggacaa ggtgaaactg gactcccctc ccggcacctc gctggcccct 960 tctggccact ccaagctgct gccccgcagc atggccccag caggcaaaca ggactgaggg 1020 gtcgagcctg cctgtgggcc actctccacc ttctcctggg ctcacagctc ttgcgctggg 1080 agtatctagc cccaggctac acagggtgtc ctcacgctga tccacactgc ccatggcttg 1140 gtccactcgg acccgcgagt catagccggg gacggggcac atcacctccc agtgggaacc 1200 tccatggtcc cccaagcgtg tcctggtcca aaacaaggat tctctggcct cagcctcctg 1260 attcatccgt ccccaaacca cgtcaggacc accttcctcc aaagctcagg aggcttgagg 1320 gggctttact ctcccccctc agcattagct ggcttcagct tgagtacaaa ggtcaaggcc 1380 ccacccctcc ccacccccac cacgaaggcc cacccaagga gagcatctgc cctttcccca 1440 ctcacctttc ctcagtgtgg gaaggacctg agggtccccg acatcctgca gaagagccca 1500 tggttcttgg ccagcaggac atttgagaaa aagggtcttc agtcggttgg acttctgagg 1560 ccccaacact cacgccatca tctccctttc ctagcctgac ccacagacgc tgtcagctct 1620 gtctcttaac tttttaggat aaataaattg gtttccagcc ccaaaaaaaa aaaaaaaaaa 1680 aaaaaaaaaa aaa 1693 // |
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