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EBI DbfetchID BC123503; SV 1; linear; mRNA; STD; MAM; 3072 BP. XX AC BC123503; XX DT 23-SEP-2006 (Rel. 89, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 5) XX DE Bos taurus caspase 3, apoptosis-related cysteine peptidase, mRNA (cDNA DE clone MGC:139802 IMAGE:8282823), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3072 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (20-SEP-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000015874; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000006695; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000021099; Bos_taurus. DR ImaGenes; IMAGp998C1317948Q. DR ImaGenes; IRAKp961F06269Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 269 Row: f Column: 6. XX FH Key Location/Qualifiers FH FT source 1..3072 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-28" FT /clone="MGC:139802 IMAGE:8282823" FT /tissue_type="Cerebral cortex , female calf 8.5 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..3072 FT /gene="CASP3" FT CDS 99..926 FT /codon_start=1 FT /gene="CASP3" FT /product="caspase 3, apoptosis-related cysteine peptidase" FT /db_xref="GOA:Q08DY9" FT /db_xref="InterPro:IPR001309" FT /db_xref="InterPro:IPR002138" FT /db_xref="InterPro:IPR002398" FT /db_xref="InterPro:IPR011600" FT /db_xref="InterPro:IPR015470" FT /db_xref="InterPro:IPR015917" FT /db_xref="InterPro:IPR016129" FT /db_xref="UniProtKB/Swiss-Prot:Q08DY9" FT /protein_id="AAI23504.1" FT /translation="MENTENSVDSKSIKTSETKILHGSKSMDSGISLEESYKMDYPEMG FT LCIIINNKNFHENTGMACRSGTDVDAANLRETFMNLKYEVRIKNDLTCKEMLELMSNVS FT KEDHSKRSSFICVLLSHGEEGIIFGTNGPVNLKKLASFFRGDYCRSLTGKPKLFIIQAC FT RGTELDCGIETDSGAEDDMACQKIPVEADFLYAYSTAPGYFSWRNAKNGSWFIQALCEM FT LKKHAHRLELMHILTRVNRKVAIEYESFSTDSAFHAKKQIPCIMSMLTKELYF" XX SQ Sequence 3072 BP; 964 A; 576 C; 670 G; 862 T; 0 other; ctgagggtca gctcctagcg cggctacggc ggaagcagac caggagtgga gtccagcaga 60 gctgcagcgt cgtagctgaa cgtaaataaa aaatgtccat ggagaacact gaaaattcag 120 tggattcaaa atccattaaa acttcagaga caaagatctt acatggaagc aaatcaatgg 180 actctggaat atccttggaa gagagttaca aaatggatta tcctgaaatg ggtttatgta 240 taataatcaa taataagaac ttccacgaaa atactggcat ggcctgtcga tctggtacag 300 acgtggatgc agcaaacctc agggaaacat tcatgaactt gaaatacgaa gtcaggatta 360 aaaatgatct tacatgtaaa gaaatgttgg aattaatgag caacgtttct aaagaagacc 420 atagcaaaag gagcagtttt atttgtgtgc ttctaagcca tggtgaagaa ggaatcattt 480 ttggaaccaa cggacccgtc aatttgaaaa aattagcaag tttcttcaga ggggactatt 540 gcagaagtct gactggaaaa cccaaacttt tcattattca ggcctgccga ggcacagaac 600 tggactgtgg tattgagaca gacagtggtg ctgaggatga catggcctgt cagaaaatac 660 cagttgaggc agacttcttg tacgcatatt ctacagcacc tggttacttt tcctggcgaa 720 atgcaaagaa cggatcctgg ttcatccagg ctctttgtga gatgctgaaa aagcacgctc 780 acaggctcga gctcatgcac attcttactc gggttaaccg aaaggtagca atagaatatg 840 agtccttttc taccgattct gcttttcatg caaagaaaca gattccttgt attatgtcta 900 tgctcacaaa agaactgtat ttctaatcac tgaggacatg gatgattttt gattttaact 960 tgtatgccaa gtgagcaaat ggtgtaactg gtactatatt ttcctcttac ctctaaatct 1020 aacctaatgg cccgggtgat aactttgaaa caagccgcct tcctagcagt aggactactg 1080 tgcagctacc tcaaacacaa ttgggtagtt gagactgagt ttaacgaaga tgaaataaaa 1140 atggattgtg gaaatcatta tgagaagaaa atgactgtaa attagcactt ctcttaatta 1200 ccaagattta gtgccgatgc tatgctacac atttgcaagc aatgagggaa aaagttaaac 1260 actgcagtag tgtatttcag tgatgtgggt atgccactgt atcagggaac atgttatggt 1320 ttttgtcaaa caacagcaat gacgatatgg aatgatgtat cctagaactt ggtggtccat 1380 acatgtggtc taagacctga agaccttgat cttaagacaa tggtattttt acatcaccta 1440 tttgagctca tggttttgtg atgtttgtgc tgagcatgtc tttgttgttt aaaaaaacca 1500 tgttttagca ctgaaaaaga actaaatgtt ttacttggga aggtgtgaga aaactaaatt 1560 gacccttgag ggtaaatgca gcaatataaa gggagacggg ttgaggacaa taaggtgctg 1620 aaatgcaact cttccaccag ctgccgggcc tcgcatacct gcagaatatc taaagggctc 1680 ttctgtcaaa acctcagact tcaatcacac tgataagagc gtgaactgaa gaaattctat 1740 agggacacac taaaacacaa cttaaataca gtgaggtata aggaagaaac agtcagtcag 1800 tcagttgggc actctgtaat tagaagatgg tttgagcctg accagggaca ctgcgcagcc 1860 tctgtgtggt ggggtcagag ccatagatta tggcttcagg aaaaagaatg cgggctagat 1920 tcttcacagc tacgggtgtg tgtggaagat gctcccaagg caagaagctc caacaaagtg 1980 aatcaaatta aacttctgaa atggaaattt tccaaagagg gtaagagtaa tcataaaaat 2040 cctagccctc taatttttgt tttatttcaa atgatggctg ttaattggat gttaaagcaa 2100 attcttatcc gcctttctgc agatagccca ttttataaaa tagacttgat atcactacca 2160 ctgaatatca gtctacttct tacttgacgc ttggggggag gaggtctaca gttttcagct 2220 tatcaggaat tgtgtaaatt aatgcttaca tacctaaata tggcttacaa gaggctctga 2280 gtgtttgggg aaaacactaa ggtttctctt tccccttcat ggttaacaag gtctcaatca 2340 cctttgctgt gcgtgggcat ggatgtgccc aagtgtgacc actgaacttt gtccaggagc 2400 tacagttctc ccaaagaaca agtcctgtac tcattccaga acgtcccttt ctgccatccc 2460 tgaatgtcag cccgtaaaag caatttcatt agcatttcct cattttccag tataagcagt 2520 gagtgtggcc taatggtctg gaccctcatc catcctttgc agaagatgga aaaaaaaaat 2580 catagcactc ttagcagtaa aattttcacg catgttaact tttattctgt tgatgtttac 2640 aatcaaggaa gaatgataca gttatgatcg tgtacttttc tctgaaatga aagaaccagg 2700 gtgcccagga ctttagcagt catccagtct ttcctccttt ggtgcccagg gaaactgaag 2760 gccagagatg ggacacagac gggggaggct ctgggcctgg ttgctcagga ggcgctgaac 2820 cttctgcatc tctgtaaccc actggttccc gtgagctttc ttgtgctaaa caaaggcgct 2880 cacatttata aatgaaagct ctttgttttg attgtgtctg taactttttc tgagtaaatg 2940 aagcatgcta tggtatcaga aggtatgttc ctatgtgaca attttgtaaa aagtttgtta 3000 ttatgcattt ctatttccaa atacaaattt taatttaaaa tgaaaaaaaa aaaaaaaaaa 3060 aaaaaaaaaa aa 3072 // |
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