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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC122800; SV 1; linear; mRNA; STD; MAM; 1134 BP.
XX
AC   BC122800;
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DT   03-SEP-2006 (Rel. 89, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE   Bos taurus spermidine/spermine N1-acetyltransferase family member 2, mRNA
DE   (cDNA clone MGC:152161 IMAGE:8401906), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1134
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (31-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000004222; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000005531; Bos_taurus.
DR   ImaGenes; IMAGp998M0818272Q.
DR   ImaGenes; IRAKp961L13281Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 281 Row: l Column: 13.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1134
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-11"
FT                   /clone="MGC:152161 IMAGE:8401906"
FT                   /tissue_type="Hypothalamus, 8.5 month female Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1134
FT                   /gene="SAT2"
FT                   /note="synonym: SSAT2"
FT   CDS             270..782
FT                   /codon_start=1
FT                   /gene="SAT2"
FT                   /product="spermidine/spermine N1-acetyltransferase family
FT                   member 2"
FT                   /db_xref="GOA:Q7PCJ8"
FT                   /db_xref="InterPro:IPR000182"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7PCJ8"
FT                   /protein_id="AAI22801.1"
FT                   /translation="MAFVMIREAKEGDCGNILRLIRELAEYEKLSDQVKISEEALRADG
FT                   FGETPFYHCLVAEILSAPGEPQGPCVVGYGLYYFSYSTWKGRNIYLEDIYVKPEYRGQG
FT                   IGSKIIKKVAEVALDKGCSQLRLAVLDWNKRAMDLYKALGAQDLTEAEGWHCFRFEGEA
FT                   MRELAGK"
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SQ   Sequence 1134 BP; 386 A; 240 C; 296 G; 212 T; 0 other;
     tgggccgaaa ttaggggcgc ccagacagtg aggaccactt cgtcctacct ctctctccgc        60
     agtagccaga atcgggcttc agcttcccag cccccggagc ccccaccgcc tagctccccg       120
     ccgttcccgg ggctttcggg gatcggaatt tgtaggcccc ttaaagggtc cgaattgctc       180
     gtctcccctt cctacagaac ggaagtgggg atcctggact tcggtccctg acgttgggga       240
     acaggcggtc cctgacgttg gggaacagga tggctttcgt gatgatccga gaagccaagg       300
     agggagattg tggaaatatc ctgaggctga ttcgggaact cgctgagtac gagaaactct       360
     cagaccaagt gaagatcagt gaagaagccc tgagagcaga tggctttgga gagactcctt       420
     tctatcactg tttggtggca gagattcttt ctgcaccagg ggagccacag gggccctgtg       480
     tggtgggcta tgggctgtat tacttcagct acagcacatg gaagggacga aatatttatc       540
     tagaagacat ctatgtgaag ccagaatatc gaggtcaagg gattggttcc aaaataatca       600
     aaaaagtggc tgaggtggct ttggataagg gctgctccca gttacgcctg gcagtcctgg       660
     actggaacaa gagggctatg gacttgtaca aggccctcgg agcccaagat ctgacggaag       720
     ctgagggctg gcactgcttt cgatttgaag gagaggcgat gagggagttg gcaggaaagt       780
     gatggcaccc ctgggggatc gctgtttcag cttctccatc cccacaaact gaacactcct       840
     tagagactgt ctccactgac caaagcctcc ctgaaggaag ggaaggaggg tcagaggtga       900
     atattcccag atagaaagag cagaagtgag gaagaggcag gccttcccac ctccttgtta       960
     agcgtgaaaa ataaatgaga attcctcctg taaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1020
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1080
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa aaaa            1134
//
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