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EBI DbfetchID BC121269; SV 1; linear; mRNA; STD; VRT; 2508 BP. XX AC BC121269; XX DT 08-AUG-2006 (Rel. 88, Created) DT 03-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Xenopus tropicalis hypothetical protein MGC145326, mRNA (cDNA clone DE MGC:145326 IMAGE:7671762), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2508 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2508 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2508 RA Klein S., Gerhard D.S.; RT ; RL Submitted (02-AUG-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998N1616951Q. DR ImaGenes; IRAKp961I24277Q. DR ImaGenes; IRBNp992D1237D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Timothy Grammer (Richard M. Harland Laboratory, CC University of California, Berkeley) CC cDNA Library Preparation: Joint Genome Institute CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 277 Row: i Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 3000. XX FH Key Location/Qualifiers FH FT source 1..2508 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="ElectroMAX DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropBrn4" FT /clone="MGC:145326 IMAGE:7671762" FT /tissue_type="Brain, adult" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8364" FT gene 1..2508 FT /gene="MGC145326" FT CDS 16..2052 FT /codon_start=1 FT /gene="MGC145326" FT /product="hypothetical protein MGC145326" FT /db_xref="GOA:Q0VA39" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/Swiss-Prot:Q0VA39" FT /protein_id="AAI21270.1" FT /translation="MRTVLAGSRRAPGCGEGMFILWLVLLLFPGAPAQYSVDDLGGLGR FT MFDGIGAISGGGATSRLLVNYPEPQRTEILDYLFKPNFGASLHIFKVEIGGDAQTTDGT FT EPSHMHYPDDQNYFRGYEWWLMKEAKKRNPAIKLIGLPWAFPGWIGNGKNWPYDFPDVT FT AYYVVSWIIGAKQYHNLDIDYIGIWNERAYDIKYIKLLRYTLDKNNLEHVKIIASDNLW FT QPIAFHMLQDPELLRVVDVIGAHYPGTHAAQDAILTGKTLWASEDYSTYNDEVGGGCWA FT RILNQNYVNGNMTSTISWNMVASYYEQLPFGLEGLMTAKEPWSGNYVVSTPIWITAHTT FT QFTQPGWYYLKTVGHLDKGGSYVALTDRLGNLTIVIETMSHNNSICIRPPLPDYNVSAQ FT YATFYLQGSFKNLQELQVWYSSLDINNTKPVTFKKLSPLKVQNGSFTLQLGVNEVYTIT FT TLLTGQKGSFPDPPESKPFPLKYKDDFSVRNPPFSEAPYFADQSGVFEYFTNTSDPGDH FT VFTFRQVLTQRPITWASDANQAISVIGNYQWSNVTVTSDIYIETPDTGGVFVAARVDQG FT GSPTDRAKGIFFWVFADGTYKVTGDLMGQTILCKGLAGVRARSWHTLTLHIDGTNAFGL FT LNGNPLWKEVVTGGPLNGWAAIGTSCFEFAQFDNFMIEVKDSE" XX SQ Sequence 2508 BP; 718 A; 508 C; 582 G; 700 T; 0 other; cagacactgt gagggatgag gacggtgctt gctggttcca ggagggctcc gggctgtggt 60 gaaggcatgt ttattctgtg gctggtattg ctgttgttcc caggagcccc agcccagtat 120 tcagtagatg atctcggagg gcttggtcgt atgttcgatg ggatcggagc aatcagcgga 180 ggaggagcaa cgtctcggct tcttgtaaac tacccagaac cacaaagaac tgagatcctg 240 gattacttgt tcaagccaaa ttttggtgcc tctttgcaca tcttcaaggt tgaaattgga 300 ggtgacgcac aaacaacaga cggaactgaa ccatctcata tgcactaccc cgatgatcag 360 aactacttcc gaggttatga atggtggttg atgaaagagg caaagaagag aaaccctgca 420 ataaaactca taggtttgcc ttgggctttt cctggctgga ttggtaatgg caaaaactgg 480 ccttacgatt ttcctgatgt gacggcttat tatgttgtgt catggattat aggtgccaag 540 caatatcata acttggatat cgactacatt gggatttgga atgagagagc ctatgacata 600 aaatacataa agcttttgcg ctacacgttg gataaaaaca atttggagca tgtgaagata 660 atagccagcg ataacctatg gcaacccatc gcctttcata tgctacagga tcctgagctg 720 ctcagggtgg tcgatgttat aggtgcccac tatcctggaa cccacgcagc acaggatgct 780 attctgacag ggaagactct ctgggcctct gaagattaca gcacttacaa tgatgaggtc 840 ggtggaggtt gttgggctcg gattctaaac caaaactatg tgaatggaaa catgacttcg 900 actatctctt ggaatatggt ggccagttac tatgaacagt taccttttgg tttggaaggg 960 ctgatgactg ccaaggagcc atggagtgga aattatgtgg tatcaacacc catatggatc 1020 actgcacaca ctacccagtt cacgcagcca ggctggtact atctcaaaac ggttggacat 1080 ttagacaaag gtggaagcta cgtggcactg actgaccggt tgggaaacct gacgattgtc 1140 attgagacca tgtcacacaa caactctatc tgcatccgtc ctccactgcc agactataat 1200 gtttcagctc agtatgctac gttctacctt caaggctcct ttaaaaacct gcaagaactg 1260 caggtttggt attcaagtct ggacatcaac aacaccaaac ctgttacatt caaaaaactg 1320 tctccactaa aggtacaaaa tggttctttc acattgcagc tgggggtgaa tgaagtttac 1380 acaataacaa ccctgttgac tggacagaag ggttcatttc ctgatccacc tgaatccaaa 1440 cctttccctc taaaatacaa ggatgacttc agtgtcagaa accccccctt ctcagaggcc 1500 ccttattttg cagatcagtc tggtgtattt gaatatttca caaatacttc tgacccaggc 1560 gatcatgtct tcacctttcg ccaagttctc actcaacgtc ctattacttg ggcatcggat 1620 gctaaccaag ccattagtgt gattggtaac taccaatggt ctaatgttac agtgacaagt 1680 gacatttaca ttgaaacccc ggacaccgga ggggtgtttg ttgctgctag agtggatcag 1740 ggaggctcac cgactgaccg ggcaaagggt atatttttct gggtgtttgc tgatggcaca 1800 tataaagtca ctggggattt aatgggccag actattctgt gcaaggggct ggcaggtgtt 1860 cgtgctagaa gctggcatac actgacccta catattgatg gtactaatgc atttgggctg 1920 ctaaatggaa atcccttgtg gaaagaagtt gtgactggag gacctttgaa tggctgggct 1980 gccattggga caagctgctt tgaatttgca cagtttgata actttatgat tgaggtcaaa 2040 gattctgagt gagccttatt cagaatgcct tatttgcaag tcttgtataa actcatagaa 2100 gactgaagaa ctgacagttc tatcatagac tgataaactg aagcaaatga tgtcatgtta 2160 actggggata tgaagatata tttttctaac acaacagaat ttagaagcat ttcctacaaa 2220 tgctgtctgc actgaatgat accctccttt tcactttttg tgaatggagc aagatattta 2280 aaagaagtat attttgaccc ctgaaggggc taaattgttt tgtctataaa aacgggtaca 2340 taggatattg attcttaatg gaaattgcaa tacttttgtt tacgtaaatc aaaaaaatga 2400 taaggaactt tctggaccat gatagctgta agttagtgtc tggactttga gacttttttt 2460 tacaggcaca aaataaaatg ttttctccta ctaaaaaaaa aaaaaaaa 2508 // |
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