 |
|
EBI DbfetchID BC120249; SV 1; linear; mRNA; STD; MAM; 1659 BP. XX AC BC120249; XX DT 17-AUG-2006 (Rel. 88, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 5) XX DE Bos taurus methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, DE methenyltetrahydrofolate cyclohydrolase, mRNA (cDNA clone MGC:142685 DE IMAGE:8388541), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-1659 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (01-AUG-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000004881; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000005225; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000010176; Bos_taurus. DR Ensembl-Gn; ENSBTAG00000011262; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000006419; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000006880; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000013428; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000014961; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000014963; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000055004; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000055617; Bos_taurus. DR ImaGenes; IMAGp998P1118237Q. DR ImaGenes; IRAKp961P09272Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: L. Savio, L. Guan and S. Moore CC cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo, L. Guan CC and Dr. S. Moore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 272 Row: p Column: 9. XX FH Key Location/Qualifiers FH FT source 1..1659 FT /organism="Bos taurus" FT /lab_host="ElectroMAX DH10B T1 Phage Resistent cells" FT /strain="Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-32" FT /clone="MGC:142685 IMAGE:8388541" FT /tissue_type="Placenta, Hereford male fetus, 6 months" FT /note="Vector: pCMV-SPORT6.0" FT /db_xref="taxon:9913" FT gene 1..1659 FT /gene="MTHFD2" FT CDS 14..1066 FT /codon_start=1 FT /gene="MTHFD2" FT /product="methylenetetrahydrofolate dehydrogenase (NADP+ FT dependent) 2, methenyltetrahydrofolate cyclohydrolase" FT /db_xref="GOA:Q0P5C2" FT /db_xref="InterPro:IPR000672" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020630" FT /db_xref="InterPro:IPR020631" FT /db_xref="InterPro:IPR020867" FT /db_xref="UniProtKB/Swiss-Prot:Q0P5C2" FT /protein_id="AAI20250.1" FT /translation="MAAASFITSLVTRLLRSAQSGRLHQRPFHLSAVRNEAVVISGRKL FT AEQIKQEVRQEVEEWVASGNKRPHLSVVLVGENPASQSYVLNKTRAAASVGINSETILK FT PASISEEELLNLINKLNNDDNVDGLLVQLPLPEHIDERKVCNAVSPDKDVDGFHVINVG FT RMCLDQCSMLPATPWGVWEIIKRTGIPTLGKNVVVAGRSKNVGMPIAMLLHTDGAHERP FT GGDATVTISHRYTPKEELKKHTALADIVISAAGIPNLITADMIKEGAAVIDVGINRIQD FT PITAKPKLVGDVDFEGVKKKAGYITPVPGGVGPMTVAMLMKNTIIAAKKVLRLEEQEVL FT KSKELGVASN" XX SQ Sequence 1659 BP; 493 A; 342 C; 405 G; 419 T; 0 other; gcccgagctg acgatggccg cagcctcctt tataacctct ttggtcaccc gactgctccg 60 gtccgcgcag agtggccgcc tccatcaacg ccctttccac ctctcggcag tgcgaaatga 120 agctgttgtc atttctggaa ggaaacttgc tgagcagatc aagcaggaag tgcggcagga 180 ggtggaagag tgggtggcgt caggcaacaa gcggccacac ctgagcgtgg ttctggttgg 240 agagaatcct gcgagtcagt cctacgtcct caacaaaacc agagcagctg ccagcgtggg 300 aatcaacagt gagaccattc tgaaaccagc ttcaatttca gaggaagaac tgttgaattt 360 gatcaataaa ctaaataatg atgataatgt agacggcctc cttgttcagc tgcctcttcc 420 agagcacatc gatgagagaa aggtctgcaa tgctgtttct ccagacaaag atgtcgatgg 480 ctttcatgta attaatgtag ggcgaatgtg tttggaccag tgttccatgt taccagctac 540 tccatggggt gtgtgggaaa taattaagcg aactggcatt ccaaccctag ggaagaatgt 600 ggttgtggcc ggaaggtcaa aaaatgttgg aatgcccatt gcaatgttgc tgcacacaga 660 tggggcacat gaacggcccg gaggcgatgc cactgtcaca atatctcatc gatacactcc 720 taaggaggag ctaaagaaac atacagctct tgcagatatt gtgatctccg ctgcaggtat 780 tccaaatctg atcacagcag atatgatcaa ggaaggagca gctgtcattg atgtgggaat 840 aaatagaatt caagatccca taactgctaa acccaagttg gttggagatg tggattttga 900 aggagtcaag aagaaagcag gttacatcac tccagtccct gggggtgttg gtcccatgac 960 tgtggcaatg ctgatgaaga ataccattat tgctgcaaaa aaagtgctga ggctcgaaga 1020 gcaggaagta ctgaagtcta aggaacttgg agtagcaagt aattgactat tgtgtcttct 1080 gtgtcatgaa cagcactcca agccagttca agaggaaaac caggtctata gacatgcaat 1140 attttttctt tacttacatg gctttaaaca atgctttgta tttattgtaa gcttaaatga 1200 gtgtgtgttt gcacacgtag ctctgcagta acctaccagg gagcatgcca ctgtcatgct 1260 gggtcatgtg atccaaccaa gagaaacatt accctagaga ttcacaggga ggaccctgtc 1320 cccctgagaa tggctgctta actgtgtcag gcctcttcag ttgaaatttg tcttctttag 1380 aaaggcagct gtgctcacca ttacaccacc aatgtgccca agcttggctt ttctatgatt 1440 gcatttccca agtgctattc caatgatgag ttgatactca cttttaggtt ccaagccttt 1500 tgagttcaac tggtcaaacc aaaggaaaaa tgttgctaga gaaaattagg gaaaagttaa 1560 agaagaaaga aatgatggta attgagtagg aaaaaattta ccctaattta ttatatgtgt 1620 tgatgataaa gaaggaaaac tgcaaaaaaa aaaaaaaaa 1659 // |
|