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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC120179; SV 1; linear; mRNA; STD; MAM; 1995 BP.
XX
AC   BC120179;
XX
DT   17-AUG-2006 (Rel. 88, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 7)
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DE   Bos taurus asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase
DE   homolog (S. cerevisiae), mRNA (cDNA clone MGC:142391 IMAGE:8200450),
DE   complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-1995
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (01-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000018192; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000024215; Bos_taurus.
DR   ImaGenes; IMAGp998K0817734Q.
DR   ImaGenes; IRAKp961G06272Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 272 Row: g Column: 6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1995
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-14"
FT                   /clone="MGC:142391 IMAGE:8200450"
FT                   /tissue_type="Fetal liver, 6 month male fetus, Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1995
FT                   /gene="ALG8"
FT   CDS             6..1586
FT                   /codon_start=1
FT                   /gene="ALG8"
FT                   /product="asparagine-linked glycosylation 8,
FT                   alpha-1,3-glucosyltransferase homolog (S. cerevisiae)"
FT                   /db_xref="GOA:Q0P5D9"
FT                   /db_xref="InterPro:IPR004856"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0P5D9"
FT                   /protein_id="AAI20180.1"
FT                   /translation="MAAFGIATGGSNWFSALALGVTLLKCLLIPTYHSTDFEVHRNWLA
FT                   ITHSLPISQWYYEATSEWTLDYPPFFAWFEYALSHVAKYFDQEMLNVRNLNYSSSRTLL
FT                   FQRFSVIFTDALFVYAVHECCKCIDGKKAGKELTEKPKFILSALLLWNFGLLIVDHIHF
FT                   QYNGFLSGLMLLSIARFFQKRHMEGAFLFAVLLHFKHIYLYVAPAYGVYLLRSYCFTAN
FT                   KQDGSIRWNSFSFVRLISLGLIVFLVSALSLGPFLALNQLPQVFSRLFPFKRGLCHAYW
FT                   APNFWALYSAFDKVLSVIGLELKLLDPNKIPKASMTSGLVQQFQHTVLPSVTPLATFIC
FT                   TLIAMLPSVFCLWCKPQGPRGFLRCLILCALSSFMFGWHVHEKAILLAVLPMSLLSVGK
FT                   AVDASIFLILTTTGHYSPFPLLFTAPELPIKIILMLLFTIYSISSLKTLFRKEKPLFNW
FT                   METFYLLGLGPLEVFCEFVFPFTSWNLKYPFIPLLLTSVYCAVGITYAWLKLYVSVLID
FT                   PPVGKTKKQ"
XX
SQ   Sequence 1995 BP; 496 A; 475 C; 394 G; 630 T; 0 other;
     gagcaatggc ggctttcggg atcgcgaccg gcggtagcaa ttggttttcg gctttggcgc        60
     tcggggtgac gctcctcaaa tgccttctca tccctaccta ccattccaca gattttgaag       120
     tacaccgaaa ctggcttgct atcacccaca gtttgccgat atcacagtgg tattatgagg       180
     caacttcaga gtggaccttg gattaccctc ccttttttgc gtggtttgaa tatgccctgt       240
     cacatgttgc gaaatatttt gatcaagaga tgctgaatgt ccgtaatctg aattactcca       300
     gctcaaggac cttactcttc cagagatttt ctgtcatctt tacagacgca ctctttgtgt       360
     atgccgtcca tgagtgctgt aaatgcattg atgggaaaaa agcaggcaaa gaacttacag       420
     agaagccaaa gtttattctg tcagcactac tgctgtggaa cttcgggttg ttgattgtag       480
     accatattca tttccagtac aatggttttt tatctggatt aatgctgctc tccattgcac       540
     gattctttca gaaaaggcat atggaaggag catttctctt tgctgttctc ctgcatttca       600
     agcacatcta cctctatgta gcaccagctt atggtgtata tttgctgcga tcttactgtt       660
     tcactgcaaa taaacaagat ggatccatcc gatggaacag cttcagcttt gtccgtctta       720
     tttccctggg actgattgtt ttcctagttt ctgctctttc attgggtcct tttctagcct       780
     tgaaccaact gcctcaagtc ttttcccgac tattcccctt caagaggggc ctctgccacg       840
     catattgggc tccaaacttc tgggctttgt acagtgcttt tgataaagtg ctgtctgtca       900
     tcggtttaga actgaaactt cttgacccca acaagattcc caaggcctca atgacaagtg       960
     gtttagttca gcagttccaa cacacagtcc ttccctcagt gactcccttg gccaccttta      1020
     tctgcactct gattgccatg ttgccctctg ttttctgtct ttggtgtaaa cctcaagggc      1080
     ccagaggctt tctccgatgt ctgattcttt gtgccttgag ctccttcatg tttggttggc      1140
     acgtccatga aaaagccatt ctcctcgcag ttctcccaat gagcctctta tcggtgggaa      1200
     aagcagtaga tgcttcaatt tttctgattc tgaccacaac aggacattat tcccccttcc      1260
     ctctgctctt cactgcacca gaacttccca ttaaaatcat actcatgtta ctgtttacca      1320
     tctatagtat ttcctcactg aagactctgt tcagaaaaga aaagcctctt tttaattgga      1380
     tggaaacttt ctacctcctt ggcctgggac ctctggaagt cttctgtgaa tttgtattcc      1440
     ctttcacctc ctggaacctg aagtacccgt ttatcccttt gttactgacc tcagtgtatt      1500
     gtgcagtggg catcacatat gcttggctca aactgtatgt ttccgtactg attgaccctc      1560
     ctgtcggcaa gacaaagaag caatgagtaa aggaactgct tggatgtatt ccaagcaatt      1620
     atttcatggg aagttaatca gaacttgaag aaagttgctg gtagcatgaa gcattcattt      1680
     cagtaaatct gtgggaggac cattcttgta aacttggcct tgcccagcct agcaacctga      1740
     ttgtcaccat ggtgagaagc cacttgtcct ccataagcag tgaaatacat ctgaaacaaa      1800
     tctcgccttc cccttttaaa attgtcattg agactgctgt gcttgctcta ggcaagaagg      1860
     gaatctgatc aacagcgtga ttttttgtag cctataataa ccatcatcag gatataaagc      1920
     ataattaaga tcatgtgcta agggaagtat aaataaaata ctattttgta tttctgcaca      1980
     aaaaaaaaaa aaaaa                                                       1995
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