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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC120020; SV 1; linear; mRNA; STD; MAM; 2062 BP.
XX
AC   BC120020;
XX
DT   17-AUG-2006 (Rel. 88, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Bos taurus arginyl-tRNA synthetase 2, mitochondrial, mRNA (cDNA clone
DE   MGC:140742 IMAGE:8275975), complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-2062
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (01-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000016967; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000022568; Bos_taurus.
DR   ImaGenes; IMAGp998F0517930Q.
DR   ImaGenes; IRAKp961M09266Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: S. Lobo, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 266 Row: m Column: 9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2062
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-22"
FT                   /clone="MGC:140742 IMAGE:8275975"
FT                   /tissue_type="Fetal cerebellum, Hereford, 6 month male
FT                   fetus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..2062
FT                   /gene="RARS2"
FT   CDS             26..1762
FT                   /codon_start=1
FT                   /gene="RARS2"
FT                   /product="arginyl-tRNA synthetase 2, mitochondrial"
FT                   /db_xref="GOA:Q0P5H7"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0P5H7"
FT                   /protein_id="AAI20021.1"
FT                   /translation="MACGFRRSIASQLSRVLDLPPENLIKSISAVPISRKEEVADFQLS
FT                   VDSLLENNNDHSRPDIQIQAMRLAEKLKCDTVVSEISTGQGTVNFKINRELLTKTVLQQ
FT                   VIEDGSKYGLKSELFSGLPKKRIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGH
FT                   QVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSSPLQHLFEVYVQVNKEAADDKNVAKS
FT                   AHEFFQRLELGDMQALALWQKFRDLSIDEYMRIYQRLGVHFDEYSGESFYREKSQEVLK
FT                   LLDSKGLLQKTLKGTAVVDLSGNGDPSSVCTVMRSDGTSLYATRDLAAAIDRMEKYNFD
FT                   KMIYVTDKGQKKHFQQVFQILQIMGYDWAERCQHVPFGVVQGMKTRRGDVTFLEDVLNE
FT                   IRLRMLQNMASIKTTKELENPEETAEQVGLAALIIQDFRGFLLSDYQFSWDRVFQSRGD
FT                   TGVFLQYTHARLHSLEETFGCGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQ
FT                   PRHIVSYLLTLSHLAAVAHRTLHVRNSPPEVAGARLHLFRAVRSVLANGMKLLGITPVC
FT                   RM"
XX
SQ   Sequence 2062 BP; 707 A; 397 C; 430 G; 528 T; 0 other;
     aggaacccgc ttcgtggagt cagacatggc gtgcggtttc cgcaggtcca tcgccagtca        60
     gctttccaga gtgttggatc ttccaccaga aaacttgatc aagtcaatat ctgcagttcc       120
     gatttccaga aaagaagagg tagctgactt ccagctttct gtggattctc tattggaaaa       180
     caacaatgac cattcaagac cagatattca aattcaagcc atgagactgg cagagaagct       240
     aaaatgtgac acagtggtga gtgaaatcag cactggtcaa gggactgtaa atttcaaaat       300
     caacagagaa ctgttaacaa agacagtact gcaacaggtg attgaagatg gctcaaaata       360
     tggattaaaa agtgaacttt tttctggcct ccccaagaag aggatcgtgg ttgaattcag       420
     ttcacctaat gttgccaaaa aatttcacgt tggacatttg cgttctacca tcataggaaa       480
     ttttatagca aatctcaaag aagctttagg acatcaagta acaagaataa attatcttgg       540
     cgattggggc atgcagtttg gtcttctggg aactggcttc cagctgtttg gctatgaaga       600
     aaaactgcag tccagtcctt tacagcatct ctttgaagtt tatgtacaag ttaataaaga       660
     agcagcagac gataaaaacg tagcaaaatc agcacatgag ttcttccagc gactggaact       720
     aggcgacatg caagcacttg ccctatggca gaaatttcgg gacttgagca tagatgagta       780
     catgcggatt taccagcgtc taggagtaca ctttgatgaa tattcaggag aatcgtttta       840
     ccgtgaaaaa tctcaagaag tcttaaagtt gctggacagt aaaggactcc tacagaaaac       900
     actaaaaggc actgctgtag tagatctttc agggaatggt gacccctcct cagtttgtac       960
     tgtaatgcga agtgacggga cgtctctgta tgcaaccaga gatcttgcag ctgctataga      1020
     tcgaatggaa aagtataatt ttgataaaat gatctatgtg acagataaag ggcaaaaaaa      1080
     gcattttcag caagtgttcc agatactgca gatcatggga tatgactggg cagaaaggtg      1140
     ccagcacgtg ccctttgggg tagtgcaggg aatgaaaact cggagaggag atgttacttt      1200
     tctggaagat gttctaaatg agattcgatt gaggatgctg cagaacatgg cttctattaa      1260
     gacaaccaaa gagctggaga atcccgagga gacagcagag caggtgggac ttgcagccct      1320
     catcattcag gacttcagag gtttcctgct gtctgactat cagttcagct gggatcgtgt      1380
     tttccagagc cgcggggaca cgggcgtctt cctgcagtac acacacgccc gcctccacag      1440
     tctggaagag acttttggat gcggttatct caatgacttc aataccgcct gcttacagga      1500
     gccacaatct gtttccattc tccagcatct tctcaggttc gacgaggtac tttataggtc      1560
     atctcaagac cttcagccca ggcacattgt cagctacctt ctaactctaa gtcacctcgc      1620
     tgcggtggca cacagaacac tgcacgtcag aaacagtcct cctgaggtgg ccggggccag      1680
     acttcacctt ttcagagctg tccgctcagt cctagccaac ggaatgaaac ttcttggaat      1740
     aacacctgta tgtagaatgt aatttctaat taaattgctt ttaaaatact aaattctagt      1800
     tatctattct tatatgcctt gctatttaga atagaattga ctattattct gtgtcagaat      1860
     ctatatttta ttgtctacat tttattaagt gatttgtcaa cttattaaat ttttttatct      1920
     tttaaaatca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1980
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      2040
     aaaaaaaaaa aaaaaaaaaa aa                                               2062
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