EBI Dbfetch

ID   BC119966; SV 1; linear; mRNA; STD; MAM; 1569 BP.
XX
AC   BC119966;
XX
DT   08-AUG-2006 (Rel. 88, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Bos taurus serine dehydratase, mRNA (cDNA clone MGC:139659 IMAGE:8281032),
DE   complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1569
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (01-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000031814; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000045109; Bos_taurus.
DR   ImaGenes; IMAGp998H2217943Q.
DR   ImaGenes; IRAKp961B20269Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 269 Row: b Column: 20.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1569
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-26"
FT                   /clone="MGC:139659 IMAGE:8281032"
FT                   /tissue_type="Thalamus, female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1569
FT                   /gene="SDS"
FT   CDS             123..1106
FT                   /codon_start=1
FT                   /gene="SDS"
FT                   /product="serine dehydratase"
FT                   /db_xref="GOA:Q0VCW4"
FT                   /db_xref="InterPro:IPR000634"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0VCW4"
FT                   /protein_id="AAI19967.1"
FT                   /translation="MMSGRPLHMETPVRDSMTLSKVAGTTAYLKLDSAQPSGSFKIRGI
FT                   GHLCKMWAERGCEHFVCSSAGNAGMAAAYAARKLGIPSTIVVPSTTPALTIQRLKNEGA
FT                   TVKVVGETLDEAIRVAKDLEKNNSGWVYVPPFDDPLIWEGHSSIVKELKETMTEKPGAI
FT                   VLAVGGGGLLCGVVQGLAEVGWRDVPVITMETIGAESFHASTKAGKLVTLPCITSVAKA
FT                   LGVTTVAAQAMKVYREHPIFSEVVSDQEAVAALEKFVDDEKILVEPACGAALAAVYSNV
FT                   IQKLQGEGKLRTPLSSLVVIVCGGSNISLAQLVALKKQLGMDGLSQ"
XX
SQ   Sequence 1569 BP; 338 A; 462 C; 433 G; 336 T; 0 other;
     cacttacccc tcctacactt catgtctgtg gaccggctat ccagtgggtc catctagacc        60
     atctccagtc tattcctcct ttgcctgagg ctcagacgcg cagctcttca cctttctctg       120
     caatgatgtc aggaagaccc ttgcacatgg aaactccggt ccgtgacagc atgactctgt       180
     ctaaagtggc tggcaccacg gcctatctca agctagacag tgcccagccc tccggctcct       240
     tcaagatccg gggcatcgga cacctctgca aaatgtgggc cgagcggggc tgcgagcatt       300
     tcgtctgctc ctcagcgggc aatgcaggca tggcagccgc ctatgctgcc aggaagctgg       360
     gcatcccctc cacgattgtc gtgcccagca ccacgcctgc cctcaccatc cagcggctca       420
     agaatgaggg cgccacggtc aaagtggtgg gtgagacatt ggatgaggcc atcagagtgg       480
     ccaaggacct ggagaaaaac aactcaggct gggtctatgt cccccccttt gacgaccccc       540
     tcatctggga aggccactct tccatcgtga aggagctgaa ggagacgatg accgaaaagc       600
     caggggccat cgtgctggca gtagggggcg gaggcctctt gtgcggagtg gttcaggggc       660
     tggcagaggt gggctggagg gacgtgcccg tcatcaccat ggagaccatc ggagcagaga       720
     gcttccacgc ttccaccaag gccggcaagc tcgtcaccct gccctgcatt accagtgttg       780
     ccaaagccct gggcgtgacc accgtggcag cgcaggctat gaaggtttat cgggaacatc       840
     ccattttctc tgaagttgtc tcggaccagg aagctgtggc cgctcttgag aagtttgtgg       900
     atgatgagaa gatcctggtg gagcccgcct gtggggccgc cctggccgcc gtctacagca       960
     acgtgattca gaagctgcaa ggagagggga aactccgcac cccgctgtcc tccctcgtgg      1020
     tcattgtttg tgggggcagc aacatcagcc tggcgcagct ggtggcgctc aagaagcagc      1080
     tgggcatgga cgggctgtcc cagtgaggac ccctccccca cccggatgaa ccctgggagg      1140
     accggagttt tctgcagcac gacccagcgc ctcattgtta atagtgttct gtgtctgctg      1200
     ggagcccatg gcccacgcca gtcagttaac ctggtttctc ctgagaccag tgtgtgcagc      1260
     agccggaaag gcagtagcca gcaaggctgt gaactgaagt cttttgagtg tttggttttt      1320
     tctcaggaag cccaaagcct acccttactc acttttctta aatccatccc cacccctacc      1380
     cctggccatg ccttgtggct tgtgggatct tagttccctg accagggatt gaacctgcgc      1440
     cctcagcagt gacagcatga gtccaagcca ccagaccacc ggggaattcc ctttactctt      1500
     ctattgtgca aactttcatt ttcataagaa gtgctttttt atcgaaaaaa aaaaaaaaaa      1560
     aaaaaaaaa                                                              1569
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