 |
|
EBI DbfetchID BC119908; SV 1; linear; mRNA; STD; MAM; 3346 BP. XX AC BC119908; XX DT 08-AUG-2006 (Rel. 88, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 7) XX DE Bos taurus asparagine-linked glycosylation 10, DE alpha-1,2-glucosyltransferase homolog (S. pombe), mRNA (cDNA clone DE MGC:139886 IMAGE:8284530), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-3346 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (01-AUG-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000030632; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000043297; Bos_taurus. DR ImaGenes; IMAGp998J1617952Q. DR ImaGenes; IRAKp961I05269Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 269 Row: i Column: 5. XX FH Key Location/Qualifiers FH FT source 1..3346 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-29" FT /clone="MGC:139886 IMAGE:8284530" FT /tissue_type="Fetal skin , female fetus 6 months, L1 FT Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..3346 FT /gene="ALG10" FT /gene_synonym="ALG10B" FT CDS 119..1543 FT /codon_start=1 FT /gene="ALG10" FT /gene_synonym="ALG10B" FT /product="asparagine-linked glycosylation 10, FT alpha-1,2-glucosyltransferase homolog (S. pombe)" FT /db_xref="GOA:Q0VD02" FT /db_xref="InterPro:IPR016900" FT /db_xref="UniProtKB/TrEMBL:Q0VD02" FT /protein_id="AAI19909.1" FT /translation="MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQA FT QRYCEGHFSLSQWDPMITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFS FT VGNFYLLYLLLRKVQPRHKASSCIQRILSTLTLAIFPTLYFFNFLYYTEAGSMFFTLFA FT YLMCLYGNHKTSALLGFCGFMFRQTNIIWAIFCAGNVIAQKLTEAWKTELQKKKEERPT FT PIKGPFSEFRKILQFLLAYSMSFKNLSMLLLLTWPYILLMFLFCAFVAVNGGIVIGDRS FT SHEACLHFPQLFYFFSFTLFFSFPHLLSLNKIRAFLCLVWKRRIQFFVITLVSIFLVWK FT FTYAHKYLLADNRHYTFYVWKRVFQRYEIVKYLLVPVYIFAGWSIADSLKSKSIFWNLM FT FFICLFTVTVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVVNFLTFYIFLN FT KTFQWPNSQDIQRFMW" XX SQ Sequence 3346 BP; 991 A; 569 C; 572 G; 1214 T; 0 other; cctccggcga gtcccgcttt gcgcgcccat ttcgatcccg agtgtcaaac tcggttttgc 60 ggacttgaga cttctgcaca gattttctgg gcctaggttc ttggctatgg gggcaggaat 120 ggctcagctg gagggttact atttctcggc tgccctgagc tgtacctttt tagtgtcctg 180 cctccttttc tctgctttca gccgggccct gcgagagccc tacatggacg agatcttcca 240 cctgccgcag gcgcagcgct actgtgaggg ccatttctct ctctcgcagt gggaccccat 300 gattactaca ttacctggct tatacctgct gtcagttgga gtggtcaaac ctgccagttg 360 gatctttgga tggtcagaac atgttgtctg ctccattgga atgctccgat ttgttaacct 420 tctcttcagt gttggcaact tctatttact atacttgctt ctccgcaaag tgcaacccag 480 acacaaggct tcctcatgta tccagaggat cttgtcaaca ttaacattag caatatttcc 540 cacactgtat ttttttaact tcctttatta tacagaagca ggatccatgt tttttactct 600 ttttgcctac ttgatgtgtc tttatggaaa tcataaaact tcagccttgc ttggattttg 660 tggcttcatg tttcgtcaaa caaatatcat ctgggctatc ttctgtgcag gaaatgtcat 720 tgcacaaaag ttaactgaag cttggaaaac tgagctacag aagaagaaag aagagaggcc 780 tacccctatt aaaggaccat tttcagaatt caggaagatt cttcagtttc ttttggctta 840 ttccatgtcc tttaagaact tgagtatgct tttacttttg acttggccgt acattcttct 900 catgtttcta ttctgtgctt ttgtggcagt taatggtgga attgttattg gtgaccggag 960 tagtcatgaa gcctgtctac actttcctca gctgttctac tttttctctt ttactctctt 1020 tttttccttt cctcacctgc tgtctcttaa caaaatcagg gcttttcttt gcttagtttg 1080 gaaacggaga attcagtttt ttgtgataac tttagtatcc atatttttag tttggaaatt 1140 tacttatgct cataaatacc tgctagcaga taatagacac tatacattct atgtgtggaa 1200 aagagttttt caaagatatg aaattgtgaa atatttgtta gttccagtct atatatttgc 1260 tggttggagt attgctgact cattaaaatc aaagtcaatt ttctggaatt taatgttttt 1320 catatgttta tttactgtta cagtacctca gaagctgcta gaatttcgtt acttcatttt 1380 accctatgtt atttataggc ttaatatacc tctgccaccc acatccagac ttgtttgtga 1440 gctgggttgc tatgcagttg tgaacttcct aaccttttat atctttctga acaagacttt 1500 tcaatggcct aatagtcaag acattcagag gttcatgtgg taatatcagg gatatcttga 1560 actctaaaaa tagacttatt atttagacta tttctataat gaaaactaag tagaaatttt 1620 ggaatttctt ttagacacta tggtgatctc agatcacatc agattttttg ttttaactat 1680 ctgaaatatg tattttaaaa tgcatattta aaatatgtat tttaaataca cacacatata 1740 cctatatatg tatgtgtata tatatatatg tttatatata tgtatatata taaacctgag 1800 aaagttaaat ggtaaagaac tgaagaaaat ttaagacttg ctctataagc ttgaataata 1860 atgggaaaaa taaaattatg tatagctatc atatttcttt aacactgttt gccactcaaa 1920 aagcttagaa gctttttata tacaggttta agaaaactga gcatgcttta tagtactaaa 1980 acttatttat taattctctt cagaaaaatt agcaaagtct ttaaaaatat ttgcaattag 2040 gtaacattgt tgattgaaaa gttgcttaac attttagtaa atataatttt aatcataagt 2100 aaaatagatt cacatagata agtaaatatt gtaaaataga ggctcttctg tgtttatcta 2160 ggaatcaagt tgtggatttt tgttaaaaat ctagaaatga tgatgtcctt tcactgttcc 2220 taatatgaag catatgatgg ccaaagataa attgtgttga tgataatacc tttcaaattg 2280 ggttttcttt ctgaaatacg ttactgtatt agtttcctat ggtggtcata acagattacc 2340 actaatttgg tggcttaaaa atctttcaca gatctggagg ctagatgcct aaaattaaca 2400 tgtcaccagt gttagctgct tttggaggct ccaaaagaga atccattcca tgccttctct 2460 tgctttctcc agtccatggt gttccttggt ttatagatgg attactccag tatctgcctc 2520 tgtcttcaca tggccttcct ctctgtcttc cttctcttat aatgacaatt ctttctcttt 2580 ggatttaaag cccaccctaa ttcaggataa ttgcatgtct agatctttaa cttaattata 2640 tctgcaaaga ctctttccat ataaggtcat atttacaggt tttaagttct aactttttgt 2700 ggagcatttt ttaacccatc aaagttacta aaggagattt ttcaataaac ttcataagac 2760 ttgtaggaaa taatttcttt gctaagatat tttaaataac atcttttctg agaggttaaa 2820 aacaaatgac ttgcaaagtc acataaaaac taaacatagc tggtgtttga tcccagtatc 2880 ccccaaaagt tagaatttaa aggaagttta taaattattt gatgtagtct tattttgtag 2940 attaggtaac aaatgtttgg gtatgattta gggggattaa ttttggattc tgtgtgtact 3000 gtttggagta cattcatttg agttgtcatt cccttacaga gaagtattat ttggatatgt 3060 taactttgat atgtaaactt agaactgtga atagaattca ttttttaatc cagtttgaca 3120 tttgtaaatt tttcaactgt gaactgtttt cagtgttgga ttatggttct ctgagtttca 3180 aataaggagt gaatttggaa aatactcttt atttgcaaat ataaaattgt gcacaagtac 3240 aaattacaag tgtagccctg agtaataaat acaaagtctt atgttgtaca caaaaaaaaa 3300 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa 3346 // |
|