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EBI DbfetchID BC118773; SV 1; linear; mRNA; STD; VRT; 1649 BP. XX AC BC118773; XX DT 25-JUL-2006 (Rel. 88, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 3) XX DE Xenopus tropicalis Mannose-1-phosphate guanyltransferase alpha, mRNA (cDNA DE clone MGC:145715 IMAGE:7708995), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1649 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1649 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1649 RA Klein S., Gerhard D.S.; RT ; RL Submitted (05-JUL-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998N0116868Q. DR ImaGenes; IRAKp961M07275Q. DR ImaGenes; IRBNp992A0434D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Timothy Grammer (Richard M. Harland Laboratory, CC University of California, Berkeley) CC cDNA Library Preparation: Joint Genome Institute CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 275 Row: m Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: CC 110645600. XX FH Key Location/Qualifiers FH FT source 1..1649 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="ElectroMAX DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropTe5" FT /clone="MGC:145715 IMAGE:7708995" FT /tissue_type="Testes, adult male" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8364" FT gene 1..1649 FT /gene="gmppa" FT CDS 80..1345 FT /codon_start=1 FT /gene="gmppa" FT /product="Mannose-1-phosphate guanyltransferase alpha" FT /db_xref="GOA:Q0VFM6" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/Swiss-Prot:Q0VFM6" FT /protein_id="AAI18774.1" FT /translation="MLKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACS FT KVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILS FT GGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVILGTTANRSQSLNYGCIVANGET FT QEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQRNQQELQLEENSSWQRTEVIR FT LEQDVFTTLAGRGKLYVYKTEGCWSQIKSAGSAIYASRLYLSQYGSTHPERLASTKEGG FT PTIRGNVYIHPTANVDPSAVLGPNVSIGMGVTVGAGVRIRESIVLHGAVLQDHSCVLNT FT IVGWDSTVGRWARVEGTPSDPNPNDPYSKIDSETLFREGKLTPSITILGCNVSIPAEVV FT ILNSIVLPHKELSRSFKNQIIL" XX SQ Sequence 1649 BP; 399 A; 433 C; 461 G; 356 T; 0 other; cactaacacg gaagtggggc agatcgctgc gttcctggct ggtacagttc tgtttctgta 60 ggaaataatc cctgcagaga tgctgaaagc agtcatcctg attggtggcc cccagaaggg 120 taccaggttc cgccctctgt cctttgaggt gccaaagcct ctgttcccgg ttgcaggggt 180 gccaatggtc cagcatcaca ttgaagcctg cagcaaggtc cccaatctaa aggagatttt 240 actgattgga ttctatcagc cgaatgaggc tctgagcagc ttcctcctca aagcgcagca 300 ggaattcaaa gtggccatca ggtacctgca ggaatattct gcccttggca ccggtggggg 360 gatttaccac ttccgagatc agattctctc tggggggcca caggcatttt ttgtgatgaa 420 tgcggacgtc tgctctgctt tccctctcgt tcccatgctg gacttccaca agcaacatgg 480 aggctcgcaa agctacgtca tcttaggaac cacggccaat cgctcacagt cgctgaatta 540 tggctgcatc gtggccaatg gggaaacgca ggaggtcctg cattacgtag agaagcccgg 600 caccttcgtt agtgacatca ttaattgcgg aatctacctc ttctcaccgt ccatcttcca 660 gcacatcgcc gaggttttcc agcgcaacca acaggagctg cagctcgagg agaactcgag 720 ctggcagcgc acggaggtta ttcgcctgga gcaggacgtg ttcaccaccc tcgcgggccg 780 cggcaagctc tatgtctaca aaacagaagg ctgctggagc caaattaaat cagcaggctc 840 agcaatttac gccagtcgcc tctacctgag ccagtatggc agcacccatc ccgagcggct 900 ggccagtaca aaggagggag ggccgactat cagagggaac gtatacatcc atcctacagc 960 caacgtggat ccctccgccg tgctgggccc taacgtatcc atcggtatgg gggtgactgt 1020 tggtgccgga gtgcggatcc gagaatccat tgttctgcac ggagcggtgc tgcaggatca 1080 cagctgcgtg ctgaacacta tagtcggctg ggacagcacc gttgggcgct gggcacgtgt 1140 ggaaggaaca cccagtgacc ccaatccgaa cgacccatat tccaaaattg acagcgagac 1200 cctgttcagg gaggggaagc tcaccccctc tatcactatt ttaggttgta acgtctccat 1260 tcccgcagag gtcgtgatac tgaactccat cgtcctccca cacaaagagc tgagcagaag 1320 cttcaagaac cagatcattc tgtaacgggc ggagcggctg tggccgtttg ggtggtagat 1380 acagatcatt ctgtagtggg cggaagggcc gtttgggtgg tagatacagt gtgtgccagt 1440 tggaagcagg acctgtcaaa ccccaggtga cagttgtggg ggtgcaggaa ggatacacgt 1500 tgcactattg gctgccgggc cggctgggag tacagactta tgggcattgg gtgctgggcg 1560 ccagtcaccg tacaaatgaa ttctatttta ggcaaataaa ggtgacagtg agcccttact 1620 ggcaaaaaaa aaaaaaaaaa aaaaaaaaa 1649 // |
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