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EBI DbfetchID BC118728; SV 1; linear; mRNA; STD; VRT; 1100 BP. XX AC BC118728; XX DT 25-JUL-2006 (Rel. 88, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Xenopus tropicalis masa, mRNA (cDNA clone MGC:145293 IMAGE:7665225), DE complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1100 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1100 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1100 RA Klein S., Gerhard D.S.; RT ; RL Submitted (05-JUL-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998N0716934Q. DR ImaGenes; IRAKp961E21277Q. DR ImaGenes; IRBNp992E0636D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Timothy Grammer (Richard M. Harland Laboratory, CC University of California, Berkeley) CC cDNA Library Preparation: Joint Genome Institute CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 277 Row: e Column: 21 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 3000. XX FH Key Location/Qualifiers FH FT source 1..1100 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="ElectroMAX DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_XGC_tropBrn4" FT /clone="MGC:145293 IMAGE:7665225" FT /tissue_type="Brain, adult" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8364" FT gene 1..1100 FT /gene="LOC733933" FT CDS 270..1049 FT /codon_start=1 FT /gene="LOC733933" FT /product="masa" FT /db_xref="GOA:Q28C69" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR010041" FT /db_xref="UniProtKB/Swiss-Prot:Q28C69" FT /protein_id="AAI18729.1" FT /translation="MALFSVPPPVTVILLDIEGTTTPITFVKDVLFPYVKENIKKYLLE FT HWQEKECQEDVTQLQKQAEKDSHLDGFVPIPSGVSDNTTEHMIQAVVDNVYWQMSFDRK FT TTALKQLQGHMWRSAYISGQLKGEVYEDVVPSIRQWRELGIKLYIYSSGSIDAQKLLFG FT YSIEGDLLKLLDGHFDTNIGHKVESKSYRNIADNIGCLPENILFLTDVVKEALAAEKAG FT LHVAVVVRPGNAALTDEDKSNCCCITSFHQIHFPSQK" XX SQ Sequence 1100 BP; 335 A; 221 C; 234 G; 310 T; 0 other; gcaaaatggt tgtgcttggg aaaagtgaag gctttaatgc cttcttgttc gagtggtttt 60 tagccaagga gcaaacattt attccggcaa cgaacgtcta ataactctac agctaaatat 120 acttttacct tgcccattaa tccgtatgtc cgtaaacctc ccttcctgtt acggcgaagc 180 agtttttttt attcagccac atgagcgtta ggagctgact tgaacgtcgc accaattcag 240 caacgcgggg caattggtgc tttgccataa tggctttatt ctccgtgccg ccaccagtta 300 cagtcatcct gttagatatt gagggtacca ctaccccaat cacgtttgtc aaggatgtac 360 tctttccata tgtaaaagaa aacattaaga aatatcttct tgagcactgg caagagaagg 420 aatgccaaga ggatgtcacc cagcttcaaa aacaggcaga gaaagactcc caccttgatg 480 gatttgtgcc cattccttct ggagtttctg acaatacaac agaacacatg atccaggcag 540 tggtggataa tgtttactgg cagatgtcct ttgatcgaaa gaccactgct cttaaacagc 600 tgcagggtca catgtggaga tcagcctata ttagtggaca gcttaagggc gaagtctatg 660 aagatgttgt cccatctatt cgacaatgga gggaattagg aatcaagctg tatatttact 720 cttcagggag tatagatgca caaaaactct tatttggata ctccattgaa ggcgatctcc 780 ttaagctgtt ggatgggcac tttgatacta atattggaca taaggtagaa agcaagagct 840 acagaaacat tgcagacaac ataggttgtt taccagaaaa cattcttttt ctgactgacg 900 ttgttaagga ggctcttgct gctgagaaag caggtttgca tgtggctgta gtagtgaggc 960 ctggcaatgc tgcattaact gatgaagaca aatccaattg ctgttgtatc acatcattcc 1020 atcagattca ttttccctcc cagaagtaat tcaagataaa tattaaataa acatgtaata 1080 ttagtaaaaa aaaaaaaaaa 1100 // |
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