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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC118371; SV 1; linear; mRNA; STD; MAM; 1573 BP.
XX
AC   BC118371;
XX
DT   01-JUL-2006 (Rel. 88, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 2)
XX
DE   Bos taurus paraoxonase 2, mRNA (cDNA clone MGC:140575 IMAGE:8272066),
DE   complete cds.
XX
KW   MGC.
XX
OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1573
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (23-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
XX
DR   Ensembl-Gn; ENSBTAG00000008361; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000011009; Bos_taurus.
DR   ImaGenes; IMAGp998C0817920Q.
DR   ImaGenes; IRAKp961G06266Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 266 Row: g Column: 6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1573
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-19"
FT                   /clone="MGC:140575 IMAGE:8272066"
FT                   /tissue_type="Fetal pons, Hereford, 6 month male fetus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1573
FT                   /gene="PON2"
FT   CDS             25..1089
FT                   /codon_start=1
FT                   /gene="PON2"
FT                   /product="paraoxonase 2"
FT                   /db_xref="GOA:Q58DS7"
FT                   /db_xref="InterPro:IPR002640"
FT                   /db_xref="InterPro:IPR008364"
FT                   /db_xref="InterPro:IPR011042"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q58DS7"
FT                   /protein_id="AAI18372.1"
FT                   /translation="MGRLLALSLLGIALALLGERLLALRNRLKASREVESVDLPNCHLI
FT                   KGIEAGAEDIDILPNGLAFFSVGLKCPGLHSFAPDKPGGILMMDLNEENPRALELRVSR
FT                   GFNLASFNPHGISTFIDSDDTVYLFVVNHPEFKNTVEIFKFEEEENSLLHLKTIKHELL
FT                   PSVNDIIAVGPEHFYATNDHYFSDPFLKYLETYLNLHWTNVVYYSPNEVKVVAEGFDSA
FT                   NGINISPDKKYIYVADILAHEIHVLEKHPNMNLTQLKVLKLDTLVDNLSIDPSSGDVLV
FT                   GCHPNGQKLFVYDPKNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDKKL
FT                   LIGTLYHRALYCEL"
XX
SQ   Sequence 1573 BP; 481 A; 328 C; 322 G; 442 T; 0 other;
     gcgaggctgc gcggctcccg agccatgggg cggctgctgg cgctgagctt gctggggatc        60
     gcgctggcgc tgctgggcga gaggctcctg gcgctcagga atcgacttaa agcctccaga       120
     gaagtggaat ctgtagacct tcctaattgc cacctgatta aaggaatcga agccggcgct       180
     gaagatattg acatacttcc caacggtctg gctttcttta gtgtgggtct aaaatgtcca       240
     ggcctccaca gttttgcacc agataagcct ggaggaatac taatgatgga tctaaatgaa       300
     gaaaacccaa gggcactgga attaagagtc agccgtggat ttaatttggc ttcatttaat       360
     ccacatggta tcagcacttt catagacagt gatgacaccg tttatctctt tgttgtaaac       420
     cacccagaat tcaagaatac agtagaaatt tttaaatttg aagaggaaga aaattctctt       480
     ttgcatctaa aaacaatcaa acatgagctt cttccaagtg tgaatgatat catagctgtt       540
     ggaccagaac atttctatgc taccaatgac cactatttct ctgatccttt cttaaagtat       600
     ttggaaacat acttgaactt acactggaca aatgttgttt actacagtcc aaatgaagtt       660
     aaagtggtag cagaaggatt cgattcagca aatgggatca atatttcacc tgataaaaag       720
     tacatctatg ttgctgatat attggctcat gaaattcatg ttttggaaaa gcaccctaat       780
     atgaatttaa ctcagttgaa ggtactcaag ttggataccc tggtggataa tttatctatt       840
     gacccttcct cgggggacgt cttggtaggc tgtcacccca acggccagaa gctcttcgtg       900
     tatgacccga agaatcctcc ctcgtcagag gttctccgca tccagaatat tttatctgag       960
     aagcctacag tgactacagt ttatgccaac aatggatctg ttctccaggg aagttctgtg      1020
     gcctctgtgt atgacaagaa gctgctcata ggcactttat accacagagc cctatactgt      1080
     gagctctaaa tggtccttct ggtatgcagg tgtgctagca tctcaacaac taattttcta      1140
     tgaattgcta attctgaggg aatttaacca gcaacgttga cccccaaatg tgtgacatac      1200
     atagtaaatt tattttggca atgaaagaac cccttcagtt cacatagcac ttttaacata      1260
     aaaagaaagt gaacagtttt taaaaatgcc aagtaaaggt aagagaagaa agctgctttc      1320
     agctaagtga atacactctg cacaaaataa gcctcatgtc tgcctttcaa ctgccagagc      1380
     atgaattcca ctgaaacagg gtagattata tttccttaaa atgtgagtga cctcagctcc      1440
     accagtgtga ccactatgac tcagaactac tgatacataa catgttttga tgtcttatac      1500
     ttacatcttt gtttactatt aaagagttgg agttacagta aagactcact aaaatccaaa      1560
     aaaaaaaaaa aaa                                                         1573
//
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