EBI Dbfetch

ID   BC118324; SV 1; linear; mRNA; STD; MAM; 1600 BP.
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AC   BC118324;
XX
DT   27-JUN-2006 (Rel. 88, Created)
DT   07-MAR-2007 (Rel. 90, Last updated, Version 6)
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DE   Bos taurus pyrroline-5-carboxylate reductase family, member 2, mRNA (cDNA
DE   clone MGC:140031 IMAGE:8286668), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1600
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (23-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000005835; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000000047; Bos_taurus.
DR   ImaGenes; IMAGp998C1817958Q.
DR   ImaGenes; IRAKp961P23269Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 269 Row: p Column: 23.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1600
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-30"
FT                   /clone="MGC:140031 IMAGE:8286668"
FT                   /tissue_type="Fetal muscle , female fetus 6 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1600
FT                   /gene="PYCR2"
FT   CDS             93..1055
FT                   /codon_start=1
FT                   /gene="PYCR2"
FT                   /product="pyrroline-5-carboxylate reductase family, member
FT                   2"
FT                   /db_xref="GOA:Q17QJ7"
FT                   /db_xref="InterPro:IPR000304"
FT                   /db_xref="InterPro:IPR004455"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q17QJ7"
FT                   /protein_id="AAI18325.1"
FT                   /translation="MSVGFIGAGQLACALARGFTAAGILSAHKIIASSPEMDLPTVSAL
FT                   RKMGVNLTRSNKETVRHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSV
FT                   EKKLMAFQPAPKVIRCMTNTPVLVREGATVYATGTHALVEDGQLLEQLMSSVGFCTEVE
FT                   EDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQ
FT                   HPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTRELQSMADQEKISPAA
FT                   LKKTLLDRVKLESPTVTTLTPTSSGKLLTRSPVPGGKKD"
XX
SQ   Sequence 1600 BP; 356 A; 460 C; 464 G; 320 T; 0 other;
     ggccgactac gctctcggtt ctccacgttt ctctcagggc ccctctgagc ggactcctgc        60
     ggcggccggg cagacgcgga gcccggataa ccatgagcgt gggtttcatc ggcgccggcc       120
     agctggcctg cgccttggcg cggggcttca cggccgcagg catcctgtcg gctcacaaaa       180
     taatagccag ctccccggaa atggacctgc ccacggtgtc cgctctcagg aagatgggtg       240
     tgaacctgac ccggagcaac aaggagacgg tcaggcacag tgacgtcctg ttcctggccg       300
     tgaagccaca catcatcccc tttatcctgg acgagatcgg tgccgacgtc caggccaggc       360
     acatcgtggt gtcctgtgcg gctggcgtca ccatcagctc tgtggaaaag aagctgatgg       420
     cgttccagcc ggcacccaaa gtgatccgct gcatgaccaa cacacctgtg ttggtgcggg       480
     agggtgcaac agtgtatgcc acaggcaccc acgccttggt ggaggacggg cagctcctgg       540
     agcagctcat gagcagcgtg ggcttctgca cggaggtgga ggaggacctg atcgatgccg       600
     tcacagggct cagcggcagc gggcctgcct atgcgttcat ggccctggac gcattggctg       660
     acggtggggt gaagatgggc ctgccacggc gcctggccgt ccgactgggg gcccaggcct       720
     tgctgggagc tgccaagatg ctgctggact cagaacagca tcccggccag ctcaaggaca       780
     acgtgtgctc ccctgggggg gccaccatcc acgccctgca cttcctagag agcgggggct       840
     tccgctccct gctcatcaat gcggttgagg cctcctgtat ccgaacacga gagctgcagt       900
     ccatggctga ccaagagaag atctccccag ctgccctcaa gaagaccctc ctggacagag       960
     tgaagctgga atcccccaca gtgaccacac tgaccccaac cagctcaggg aagctcctca      1020
     cgagaagccc agtcccagga ggcaagaagg actaaggcag cctgggtctg ctctcccctg      1080
     tgtccagagc cctcggctgc gggggctcaa tcagcttcag gtcctcatga taaacctcct      1140
     tccgtctgtt agacccagca gcgctggttt cccctcctgt ctcatgttag aagatgctct      1200
     gaaggggtgg ctggaaacca gatgcagccc tgcagacctc acacagttgc aggagagggc      1260
     ggctgggact ccattcagag gcccagctgc gtaggcaggc ctggtgacct tcagtggatg      1320
     accccttcaa ctggggtcct cccactggag cccacagcag ggtcagtttg ttgctgagtc      1380
     aaggtgtacg aaacatgaca aggacttttt gaattggtaa aaggaaaaga agtgagtgac      1440
     ttagaattat cacaatcaga aatgcacatc ttagactgtg ttatatttaa ctcttgcttc      1500
     acaggtatac cattgaaaat gtgttattca atgttgctaa gtttggctgc tttaataaag      1560
     ttttattttt tattaaaaaa aaaaaaaaaa aaaaaaaaaa                            1600
//