EBI Dbfetch

ID   BC118181; SV 1; linear; mRNA; STD; MAM; 2222 BP.
XX
AC   BC118181;
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DT   27-JUN-2006 (Rel. 88, Created)
DT   24-JAN-2007 (Rel. 90, Last updated, Version 2)
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DE   Bos taurus UDP-glucose pyrophosphorylase 2, mRNA (cDNA clone MGC:139678
DE   IMAGE:8212009), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-2222
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (23-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000000111; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000000121; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000044762; Bos_taurus.
DR   ImaGenes; IMAGp998L2317764Q.
DR   ImaGenes; IRAKp961C18268Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Taniguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Bala M, Barber S, Babakaiff R, Beland J, Chand S, Chun E,
CC   Del Rio L, Gibson S, Kirkpatrick R, Liu J, Matsuo C, Mayo M,
CC   Palmquist D, Santos RR, Stott J, Tsai M, Wong D, Wynhoven B, Hanson
CC   R, Siddiqui A, Holt R, Jones SJ, Marra MA
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 268 Row: c Column: 18.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2222
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-26"
FT                   /clone="MGC:139678 IMAGE:8212009"
FT                   /tissue_type="Thalamus, female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..2222
FT                   /gene="UGP2"
FT   CDS             308..1834
FT                   /codon_start=1
FT                   /gene="UGP2"
FT                   /product="UDP-glucose pyrophosphorylase 2"
FT                   /db_xref="GOA:Q07130"
FT                   /db_xref="InterPro:IPR002618"
FT                   /db_xref="InterPro:IPR016267"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q07130"
FT                   /protein_id="AAI18182.1"
FT                   /translation="MSRFVQDLSKAMSQDGASQFQEVIRQELELSVKKELEKILTTAPS
FT                   HEFEHTKKDLDGFRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIKARGLPDNVSSV
FT                   LNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYDTDVPLVLMN
FT                   SFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKNVSYSGENTEAWYPPG
FT                   HGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKPCEFVME
FT                   VTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLAAVK
FT                   RLQEQNAIDMEIIVNPKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTS
FT                   DLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHL
FT                   TVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSGNLRILDH"
XX
SQ   Sequence 2222 BP; 729 A; 390 C; 474 G; 629 T; 0 other;
     agctggccct catttgtgtc aggggtgcag tgtaggctgg agttccaagc agactcagtc        60
     gcaccaagtt tctgtctttt gaaagtgggg aagggggtta agtttttttt tgttttgttt       120
     tgtttttttg gaggcagttt tagttttttg agtaaatact ctcctaagtg gccaaacata       180
     ggaagagaag aaagaattcg tcatttgtta aagcagaagt ggaagaaaga cctctatagc       240
     gttgactcct ctagacattt aaatatattt atatttgtaa gccagagtat tttaataaat       300
     ccctaaaatg tcgagatttg tacaagatct cagcaaggca atgtctcagg atggtgcttc       360
     tcagttccaa gaagtcattc gacaagaact agaattatct gtgaagaagg aactagaaaa       420
     gatactcacc acagcaccat cacatgaatt tgaacacact aaaaaagacc ttgatggatt       480
     tcggaagcta tttcacagat ttttgcaaga aaagggacct tctgtggatt ggggaaaaat       540
     ccagagacct ccggaagatt cgattcagcc ctatgagaag ataaaggcca ggggcttacc       600
     tgataatgta tcttctgtgc tgaacaagct ggtggtggtg aaactcaatg gtggtttggg       660
     aaccagcatg ggctgcaaag gcccaaagag tctgattggc gtgaggaacg agaatacctt       720
     tctggatctg accgttcagc aaatcgaaca cttgaacaaa acctacgata ctgatgttcc       780
     tcttgttcta atgaactctt ttaacacgga tgaagatacc aaaaaaatac tacagaagta       840
     taatcactgt cgtgtgaaaa tctacacgtt taatcaaagc aggtacccaa ggattaataa       900
     agaatcgtta ctgcctgtag caaagaatgt atcatactca ggggaaaata cagaagcgtg       960
     gtatcctccg ggtcatggag atatttatgc cagtttctac aactctggtt tgctcgacac      1020
     ctttatagga gaaggcaaag agtatatttt tgtgtccaac atagataatc tgggtgccac      1080
     agtggatctt tatattctta atcatctcat gaacccaccc aatggaaaac cttgtgaatt      1140
     tgtcatggaa gtcacaaata aaacccgtgc ggatgtaaag ggtgggacac tcactcagta      1200
     tgaaggcaaa ctgagactgg tggaaattgc tcaagtgcca aaagcgcatg ttgatgagtt      1260
     caaatctgta tcaaaattca aaatatttaa cacaaacaac ctatggatct ctcttgctgc      1320
     agttaaaaga ctgcaggagc agaatgctat tgacatggaa atcattgtaa atccaaagac      1380
     tttggatgga ggcctgaatg ttattcagtt agaaactgca gtaggggctg ccattaaaag      1440
     ttttgagaac tctctaggta ttaatgttcc tagaagccgt tttctgcctg tcaaaaccac      1500
     atcagatctc ttgcttgtga tgtcaaacct ctacagcctt aatgcaggat ctttgacaat      1560
     gagtgaaaag cgggaatttc ctacagtgcc cttggttaaa ttaggcagtt ctttcacaaa      1620
     ggttcaggat tatctaagaa gatttgaaag tataccagat atgcttgaac tggatcacct      1680
     cacagtttca ggagatgtga catttggcaa gaatgtttca ttaaagggaa cggttatcat      1740
     catcgcaaat cacggtgacc gaattgacat cccacctgga gcagtattag agaacaagat      1800
     tgtatctggg aacctgcgta tcttggacca ctgaaatgaa aaatactgta cacactttat      1860
     actcattatg ggctaaacag tttcttacaa tgaaaagttc ctctaagatt ataaaatagg      1920
     caggtactgt tctctgttac tgtacccggc agtgttaatt tttaaagtag agttttctgc      1980
     agtatgcttt tagtcttaag aaaagcacag atggaagcaa tacttttctt tttggaagaa      2040
     gatcctgaaa gttaattcat ctgaaagtgc aatattgttt aatcttaaaa ctggggcagc      2100
     tctgctggaa aatcttttaa cagaggcctc agtgatggtc attttgaact gcttgtgatt      2160
     tcaaaaataa agctgtgaag caataaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      2220
     aa                                                                     2222
//