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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC118168; SV 1; linear; mRNA; STD; MAM; 1264 BP.
XX
AC   BC118168;
XX
DT   01-JUL-2006 (Rel. 88, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 6)
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DE   Bos taurus dihydrodiol dehydrogenase (dimeric), mRNA (cDNA clone MGC:139501
DE   IMAGE:8216711), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1264
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (23-JUN-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000013337; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000043087; Bos_taurus.
DR   ImaGenes; IMAGp998P2117776Q.
DR   ImaGenes; IRAKp961G09268Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 268 Row: g Column: 9.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1264
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-26"
FT                   /clone="MGC:139501 IMAGE:8216711"
FT                   /tissue_type="Thalamus, female calf 8.5 months, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1264
FT                   /gene="DHDH"
FT   CDS             33..1040
FT                   /codon_start=1
FT                   /gene="DHDH"
FT                   /product="dihydrodiol dehydrogenase (dimeric)"
FT                   /db_xref="GOA:Q148L6"
FT                   /db_xref="InterPro:IPR004104"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q148L6"
FT                   /protein_id="AAI18169.1"
FT                   /translation="MALRWGIVSAGLISSDFTTMLRMLPRSEHQVVAVAARDLSRAKEF
FT                   AKKHDIPKAYGSYEELAKDPDVEVAYIGTQHPQHKAAVLLCLTAGKAVLCEKPMGVNAA
FT                   EVREMVAEARSRGLFFMEAIWTRFFPAVEALRSVLAQGTLGDLRVVRAEFGKNLTHVHR
FT                   ATDWAQAGGGLLDLGIYCLQFISMVFGGQKPEKISAVGRRHETGVDDTVTVILQYPGGV
FT                   HGSFTCSISAQLSNTVSVSGTKGMAQLLDPCWSPTELVVKGEHKEFPLPPAPGKEFNFT
FT                   NGMGMSYEAKHVRECLQKGLKESPVIPLVESELLADILEEVRKAIGITFPQDKH"
XX
SQ   Sequence 1264 BP; 314 A; 321 C; 373 G; 256 T; 0 other;
     ggtagggaca tttgggactc cgggttgcgg cgatggcgct tcgctggggc atcgtgtcgg        60
     ctggccttat ctccagcgac ttcacgacga tgctgcggat gctgcctcgc tctgagcacc       120
     aggtagtggc ggtagcggcc cgtgacctga gccgggcgaa ggagtttgct aagaaacacg       180
     acatccccaa ggcctatgga tcctatgagg aactggccaa ggaccccgac gtggaggtgg       240
     cctacattgg cacccagcac ccccagcaca aggccgcagt gttactctgc ctgacagcgg       300
     gcaaggctgt gttgtgcgaa aagcccatgg gtgtgaacgc cgcggaagtg cgcgaaatgg       360
     ttgctgaggc ccgatcccga ggcctcttct ttatggaggc catctggacc cggttcttcc       420
     ctgctgtaga ggctctgagg tctgtcctgg cccagggaac tctgggggac cttcgggtgg       480
     ttcgggcaga atttgggaag aatctcaccc acgtacaccg ggccacagac tgggcccagg       540
     cgggaggtgg cttgttagac cttggcatct actgcctcca gttcatctcc atggtcttcg       600
     gtgggcagaa gccagagaag atttcagctg tgggaaggcg ccatgaaaca ggtgtggacg       660
     acactgtcac tgtgatactc cagtacccag gaggggtcca cggcagcttc acctgcagca       720
     tctctgccca gctctccaac acggtgtccg tgagtggtac caagggcatg gcccagctcc       780
     tcgacccctg ctggagccca acagagctgg tggtgaaggg ggagcataag gagttcccac       840
     tgcctccagc cccaggcaag gagttcaatt ttacaaatgg aatgggcatg agttatgagg       900
     ccaagcatgt ccgggaatgc ctgcagaaag gcctgaagga aagtcctgtg attcctctgg       960
     tggaaagtga gctcctggct gacatccttg aggaggtgag gaaggccatt ggaatcacct      1020
     tcccccaaga caaacactga tgtatgctct gaacaaataa agacatgctg ggaattcttt      1080
     ggctgtccag tggtcaggac tcggcactgt cacttctggg gcctgggttc aatccctggt      1140
     cagagaacta agatcttgta agcctcaggg catggcaaag taaatacaaa aattaaataa      1200
     aataaataat aaagttgtgt ttccacagaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1260
     aaaa                                                                   1264
//
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