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EBI DbfetchID BC118106; SV 1; linear; mRNA; STD; MAM; 4115 BP. XX AC BC118106; XX DT 01-JUL-2006 (Rel. 88, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 5) XX DE Bos taurus oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), DE mRNA (cDNA clone MGC:137985 IMAGE:8088963), complete cds. XX KW MGC. XX OS Bos taurus (cattle) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; OC Bovinae; Bos. XX RN [1] RC NIH-MGC Project RP 1-4115 RA Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y., RA Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C., RA Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J., RA Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J., RA Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A., RA Holt R., Jones S.J., Marra M.A.; RT ; RL Submitted (23-JUN-2006) to the EMBL/GenBank/DDBJ databases. RL BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100, RL 570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada XX DR Ensembl-Gn; ENSBTAG00000006029; Bos_taurus. DR Ensembl-Tr; ENSBTAT00000007922; Bos_taurus. DR ImaGenes; IMAGp998B0117393Q. DR ImaGenes; IRAKp961P01264Q. XX CC Contact: Robert Kirkpatrick CC Canada's Michael Smith Genome Sciences Centre CC BC Cancer Agency CC Suite 100, 570 West 7th Avenue, Vancouver, British Columbia, CC Canada, V5Z 4S6 CC Tel: 1-604-707-5900 x5406 CC Fax: 1-604-876-3561 CC Email: robertk@bcgsc.ca CC Tissue Procurement: Lee Alexander, USDA, ARS, NPA CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Bovine Genome Sequencing Program, Genome CC Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y, CC Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L, CC Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H, CC Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W, CC Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R, CC Jones S, Marra M CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 264 Row: p Column: 1. XX FH Key Location/Qualifiers FH FT source 1..4115 FT /organism="Bos taurus" FT /lab_host="DH10B" FT /strain="L1 Hereford" FT /mol_type="mRNA" FT /clone_lib="GC_BGC-16" FT /clone="MGC:137985 IMAGE:8088963" FT /tissue_type="Uterus, 8.5 month old female L1 Hereford" FT /note="Vector: pExpress1" FT /db_xref="taxon:9913" FT gene 1..4115 FT /gene="OGDH" FT CDS 31..3102 FT /codon_start=1 FT /gene="OGDH" FT /product="oxoglutarate (alpha-ketoglutarate) dehydrogenase FT (lipoamide)" FT /db_xref="GOA:Q148N0" FT /db_xref="InterPro:IPR005475" FT /db_xref="UniProtKB/Swiss-Prot:Q148N0" FT /protein_id="AAI18107.1" FT /translation="MFHLRTCAAKLRPLTASQTVKTFSQNRPAAARTFGQIRCYTAPVA FT AEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLPLSPGSL FT SAVARAGPLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPA FT DIISSTDKLGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEF FT MFINDLEQCQWIRQKFETPGVMQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLE FT GCEVLIPALKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAA FT DEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTE FT GKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSS FT PYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMD FT EPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFARSKDE FT KILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLTEDILTHIGNVASSVPVEDFTIHGGL FT SRILKTRGELVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQN FT VDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNT FT AQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVLPDL FT KEANFDINQLYDCNWVVVNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSN FT FDEMLPGTHFQRVIPEDGPAAQNPGNVKRLLFCTGKVYYDLTRERKARDMVEQVAITRI FT EQLSPFPFDLLLQEVQKYPSAELAWCQEEHKNQGYYDYVKPRLRTTISRAKPVWYAGRD FT PAAAPATGNKKTHLTELQRLLDTAFDLDAFKNFS" XX SQ Sequence 4115 BP; 930 A; 1231 C; 1160 G; 794 T; 0 other; gacagtcgtg agagagacat caggacaaga atgtttcact taaggacttg tgctgctaag 60 ttgaggccgt taacggcttc ccagactgtg aagacatttt cacaaaacag accagcagca 120 gctaggacgt ttgggcagat acggtgctat actgcccccg ttgctgcaga gcctttcctc 180 agcgggacta gttcgaacta tgtggaggaa atgtactatg cttggttgga aaaccccaaa 240 agtgtacaca agtcatggga catttttttc cgaaacacca atgctggagc gcccccaggc 300 accgcctacc agagcccact ccccctgagc ccgggctccc tgtcagctgt ggccagagca 360 gggcccctgg tggaggccca gcccaacgtg gacaagctgg tggaggatca cctggcggtg 420 cagtcgctca tcagggctta ccagatacga gggcaccatg tagcacagct ggaccccctg 480 ggaattttgg atgctgatct ggactcctcc gtgcccgctg atattatctc atccacagac 540 aaacttggat tctacggtct ggacgagtct gacctggaca aggtcttcca cctgcccacc 600 accacattca ttggagggca ggagtcggct cttcctctgc gggaaatcat ccgacgcctg 660 gagatggcct actgccagca cattggggta gaattcatgt tcatcaatga cctggagcag 720 tgccagtgga tccggcagaa atttgagaca cccggggtca tgcagttcac caacgaggag 780 aagcggaccc tgctggctcg gctcgtgcgc tccaccaggt ttgaggagtt cctgcagcgg 840 aagtggtcat ctgagaagcg ctttggtctg gaaggctgcg aagtactgat tcctgccctc 900 aagaccatca ttgacaagtc cagtgagaac ggagtggact acgtgatcat gggaatgcca 960 cacaggggga gactgaatgt gcttgcaaac gtcatcagga aggagctgga gcaaattttc 1020 tgtcagttcg actcaaagct ggaggcagct gatgagggtt ctggagatgt gaagtaccac 1080 ctgggcatgt atcaccggcg gatcaaccgt gtgaccgaca ggaatatcac cctgtcgctg 1140 gtggcaaacc cttcccacct ggaggctgcc gatcccgtgg tgatgggcaa gaccaaagct 1200 gagcagtttt actgcgggga caccgagggg aagaaggtca tgtccatcct tctgcatggg 1260 gacgccgcat ttgctggcca gggcatcgtt tatgagacct tccacctgag tgacctgcca 1320 tcttacacga ctcatggcac tgtccacgtg gttgtcaaca accagatcgg cttcaccaca 1380 gacccgcgaa tggcccgctc ctcaccctac cccactgatg tggcccgagt ggtgaatgcc 1440 cctatcttcc acgtgaactc ggatgacccg gaggcagtca tgtatgtgtg caaagttgca 1500 gctgagtgga ggagcacctt ccacaaggat gtggtggtgg acctggtgtg ttatcggcgc 1560 aatggccaca acgagatgga tgagcccatg ttcacccagc cgctgatgta caagcagatc 1620 cgcaaacaga agcccgtgct gcagaagtac gcagagttgc tggtgtcgca gggcgtggtc 1680 aaccagcctg agtatgagga ggagatctcc aaatatgaca agatctgtga ggaggccttc 1740 gccaggtcca aggacgaaaa gatcttgcac atcaagcact ggctggactc cccctggcct 1800 ggcttcttca ccctggacgg gcagccgagg agcatgacct gcccctccac gggcctgacg 1860 gaggacattc tcacacacat tgggaacgtg gccagctccg tgcctgtgga ggatttcacc 1920 attcacggag ggctgagccg gatcctgaag acccgtgggg agctggtgaa gaacaggact 1980 gtggactggg ctctggcgga gtacatggct tttggctccc tactgaagga gggcatccat 2040 atccggctga gcggccagga tgtggagcgg ggcactttta gccatcgcca ccacgtcctg 2100 catgaccaga acgtggacaa gagaacctgc atccccatga accacctctg gcccaaccag 2160 gccccctaca ccgtgtgcaa cagctcactg tccgagtacg gggtcctggg cttcgagctg 2220 ggttttgcaa tggccagtcc taacgccctg gtcctctggg aggcccagtt tggtgacttc 2280 cataacacgg cccagtgcat catcgaccag ttcatctgcc caggacaagc caagtgggtg 2340 cggcagaacg gcattgtgct gctgctgccc catggcatgg agggcatggg cccagaacat 2400 tcctccgcca ggccagagag gttcctgcag atgtgcaatg atgatccaga cgtcctaccg 2460 gaccttaagg aagccaactt tgacataaat cagctgtatg attgcaactg ggttgtcgtc 2520 aactgctcca cccctggcaa cttcttccac gtgctacgtc gccagattct cctgcccttc 2580 cggaagccgt taatcatctt caccccaaag tccctgctgc ggcatcccga agccaggtcc 2640 aactttgacg agatgcttcc aggaacccac ttccagcggg tgatcccaga agatggccct 2700 gcagcacaga acccaggaaa cgtcaagaga cttctcttct gtactggcaa ggtgtactat 2760 gacctcaccc gagagcgcaa agcgcgggac atggtggagc aggtggccat caccaggatc 2820 gagcagctgt cgcctttccc cttcgacctc ctgctgcagg aggtccagaa gtaccccagc 2880 gctgagctgg cctggtgcca ggaggagcac aagaaccaag gctactacga ctacgtgaag 2940 cccaggctgc gaaccaccat cagccgcgcc aagcctgtgt ggtatgctgg ccgggaccca 3000 gcagcagctc cagccaccgg caacaagaag acccacctca cggagctgca gcgcctcctg 3060 gacacagcct tcgacctgga cgccttcaag aacttctcgt agatgccgcc tgggctgctt 3120 gggccgccct gcacctcacg actgcccctc gcttccaact aaagcatcgt gcctccgcac 3180 tgcccgcacc tctgcccgtc cataccgcac gcaccccgtg ctcacttagg aactaggctg 3240 tttgcccctc ctgtgcttgg ctgcccccca agccagatgc ccccccgggc gctacagctg 3300 ctgtccagct gaacagcctt catggagaca gtggggagcg ggaggaggag agggagcccc 3360 tgcaggtgtc ctgggaggga agatctgccc ccaccccgtc cccccagctc accccacagg 3420 accggcctca tgcggcatcc ccctgtgcca gcagtcctgg tcacccagca aggggttccc 3480 gcacctggac aagggtggcc tcctctcccc aagctgagcc cccaacgcct cgcaggagtc 3540 gtcagtgtct gagggtttgt ggggtgggtg ggctccggca ggaccctcac catgcggtgg 3600 accaagggca ctgctgcagg acggctgctg ggagatggcc cgagactgac ctggcacaga 3660 gcgggagggt ccactctgca gcaaccactt ccaccgctcc agagggtccc ggccctgtgc 3720 gggccgtgca cactccacca cctggggctg ggtgtggcca ggaagtgccg ctcagggccg 3780 gggcgccggc tgctcctctg gtccttccct tcacttccaa gccacctcct ttcctcttcc 3840 cttcaacgcg atggagactc cgaagcattc ttctctctgc tgtgccaaag ctggtcagag 3900 ggggagagga ggggcaggag tgaggggcag cacaaggcca aggggccagc tcccctgacc 3960 cgtcacaggg acaaatctga tttatttatt ttggttaaaa aaagtaaccg aacaattttg 4020 cattgcattt ggcttgaccc ataaaatctg agttctccct gaaaaaaaaa aaaaaaaaaa 4080 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa 4115 // |
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