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EBI DbfetchID BC117664; SV 1; linear; mRNA; STD; VRT; 5439 BP. XX AC BC117664; XX DT 08-JUN-2006 (Rel. 88, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 2) XX DE Danio rerio zgc:136939, mRNA (cDNA clone MGC:136939 IMAGE:7996042), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-5439 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-5439 RG NIH MGC Project RA ; RT ; RL Submitted (06-JUN-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998B0817152Q. DR ImaGenes; IRAKp961L03260Q. DR ImaGenes; IRBOp991B0979D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 260 Row: l Column: 3 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..5439 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_7" FT /clone="MGC:136939 IMAGE:7996042" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..5439 FT /gene="zgc:136939" FT CDS 282..2510 FT /codon_start=1 FT /gene="zgc:136939" FT /product="zgc:136939" FT /db_xref="UniProtKB/TrEMBL:Q1ECU6" FT /db_xref="ZFIN:ZDB-GENE-060616-238" FT /protein_id="AAI17665.1" FT /translation="MGSVYLWKLSSQKLGFFLVSFGFIWGMMLLHFTIQQRATHESSAQ FT LRMQILDLSKRYIKALAEENQSVMDGPYVGTMTAYDLKKTLAVLLDNIMQRLSKLESKV FT DNIMYNGTSANLTNGTGTPGPNPVNPEKVNVADLLNGAQEKCELPSLDGFPHCEGKIKW FT MKDMWRSDPCYGNYGVDGSTCSFFIYLSEVENWCPRLPWRIKNIGDDLDRKTQLEVRTS FT FDELYRVMSRREEFRWMMLRIKRMEEPWVSAVRSLANKQNLHHRKRKKILVHLGLLTKE FT SGFKIAENAFSGGPLGELVQWSDLITTLYLLGHDIRISASLAELKEIMKKVMDNKSSCP FT TKGDKVVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPEFNHAHYAQSKGHK FT TPWGKWNLNPQQFNTMFPHTPDNSFLGFVVEQHLNASDVKHIDDIKRQNQSLVYGKVDN FT FWKDKKKYLDIIHSYMEVHGTVHGTSTVHLPGYVKNHGILSGRDLQFLLRETKLFVGLS FT FPYEGPAPLEAIANGCAFLNPRFDPAKSSKNTDFFKGKPTLRELTSQHPYAEVYIGRPH FT VWTVNIEDPAEVENAIKAILSQKIEPYLPYEFTCEGMLQRVNAFIENQDFCHGQVMWPP FT LSSMQVRLAPAGKSCKQVCQEEQLICEPSFFQHLNKDKDLARYGVECKTVDSANDIVVP FT AFSESSRHCVFQSDLLLFSCAGAHQTLTRICPCRDYMKGQVALCKDCL" XX SQ Sequence 5439 BP; 1585 A; 1158 C; 1197 G; 1499 T; 0 other; tgcgtggatc cacactgacg ccgatcacag tgaaaccacc ggcttttcca cagcatttaa 60 cgtccatatc atcaccccaa atctcaaatc agtgtcttca ctgtaatgga gcttctggtg 120 ggcatgtctc ttgtttgatt gacatctcac gctaaaagga atggactaca gtgaagaaaa 180 gagcgcgtag agaccacacc ctcaaaacac aatgaggctg aactcgtctt gagttgccca 240 gacacacact ccacacactc acaccaacaa actgtctcac catgggctcc gtgtacttgt 300 ggaagttgtc ttcccaaaag ttgggtttct tcctcgtgag tttcggcttc atttggggga 360 tgatgctgct tcatttcacc atccagcaga gggcgacgca tgaaagcagc gcgcagctac 420 gaatgcagat actggacctt agcaagcgat acattaaagc ccttgcagag gagaaccaaa 480 gcgtgatgga tggaccctac gtaggcacca tgacagcata tgatctgaag aagactctag 540 ctgttcttct ggacaacata atgcagagat tgtccaagct ggagtctaaa gtggacaata 600 tcatgtacaa tggcaccagc gccaacctga ccaacggcac cgggactccc ggaccaaacc 660 cagtcaaccc tgagaaagtc aacgtggcag atttgctaaa cggagcgcag gaaaaatgtg 720 aactgccctc gcttgacggg tttccacatt gtgaaggcaa gataaagtgg atgaaggaca 780 tgtggcgttc ggacccctgc tacggcaact atggtgtgga tgggtccacc tgctcattct 840 tcatttattt gagcgaggtt gaaaactggt gccctcgtct gccgtggagg attaagaaca 900 ttggggatga cttggacagg aaaacacagt tggaggtccg cacaagtttt gacgagttgt 960 atcgcgtgat gtcgcggcgt gaggagtttc gctggatgat gctgcggatc aagcggatgg 1020 aggagccgtg ggtcagcgcc gttcgctcac ttgccaacaa acaaaacctc caccaccgca 1080 aacgcaagaa gatcctggtt cacctgggct tgttgacgaa ggagtctggt tttaagatag 1140 cggagaatgc gttcagcggc ggtcctctgg gtgagctggt gcagtggagc gacctcatca 1200 ccacactcta cctgctcgga cacgacatcc gaatttcagc ctccctcgct gagctcaaag 1260 agatcatgaa gaaggtgatg gacaataaat ccagctgccc gaccaaaggc gataaagtgg 1320 tggagctgat ttacatcgac atcgtgggcc tggcgcagtt caagaagacc ctcggcccgt 1380 cctgggtcca ttatcagtgt atgctgcgtg tgctggactc attcgggacg gagccggagt 1440 tcaatcacgc tcactacgcc cagtccaaag gccacaagac tccgtggggc aagtggaact 1500 tgaacccgca gcagttcaac accatgtttc ctcacactcc cgataacagt ttcctgggct 1560 tcgtggttga gcagcatctg aacgccagtg acgtcaaaca catcgacgac atcaagcggc 1620 aaaaccaatc gctggtttac ggaaaagtgg acaacttctg gaaggataaa aagaagtacc 1680 tagacattat tcactcctat atggaagttc acggcacagt ccatggcact agtacagtcc 1740 acctgcctgg ctacgtgaag aaccacggca tcctgagcgg acgagacctg cagttcctgc 1800 tgcgagagac caagcttttt gttggcctgt cgtttcccta tgaaggcccc gcccctctcg 1860 aggcgatagc caatggctgt gcattcctga acccgaggtt tgatcctgct aagagcagca 1920 agaacaccga tttcttcaaa ggcaaaccca cactcagaga gttgacgtct cagcatccgt 1980 atgctgaggt ttacatcggc cggccgcacg tctggaccgt taacattgaa gatccggccg 2040 aggtggagaa cgccattaaa gccatactga gccagaagat agagccgtat ctgccgtatg 2100 agttcacctg tgaagggatg ctgcagcggg tcaatgcttt cattgagaac caggatttct 2160 gtcatggtca ggtgatgtgg ccgccgctca gctccatgca ggtccggctg gctccggctg 2220 ggaaatcctg caagcaggtg tgtcaagagg agcagctcat ctgcgagcct tcattcttcc 2280 agcatcttaa taaagacaag gatctggcca ggtacggtgt ggagtgtaaa acggtggact 2340 cagccaatga tattgtagtc ccggcgttca gcgaatcgtc ccggcactgt gtgtttcagt 2400 ccgacctgct gctgttcagc tgcgctggag ctcatcagac cctcacgcgc atctgtccct 2460 gcagagacta catgaaaggc caggtggcgc tgtgtaaaga ctgcttataa cacacacacc 2520 acaccacgca cttttcggca actcgtacca actactggtg gcgttcaaaa acgcgccaaa 2580 tggacaataa taaagcgtac agtgccagag gtgtaatggt gcgattaaac gaaacaatgc 2640 agagtaattg agcgcttgtt ttattcccat acacacacca actcgaacgc tggagcgcgg 2700 cagctaagaa aaaatacaat ggacgtcgca tagagcgagg agaattttat tattattatt 2760 ttgctggatt tgtttttgtt gttgttgcgc aaacctgaac tagattcagc ctgacatact 2820 tgaagcggtg tgcaggggat caggactcta cactgccacc tgcaggctcg gaggaaacac 2880 tgtagtgaca tttattacgc cagttcttcg ttctgctgat ttgttttttt tttcgtagct 2940 ttttgaagaa tgactttcta tcattggacc aagcttgaca ccggacatct cggagggatc 3000 ttcgcccttt ggaggattgt tttgtttgtt tgtgtggcaa tgagtatagt tttaaaatca 3060 ttgggaaaca aattcatcga acgatggact acgaaaattt tactttttca tagaaaaaaa 3120 tcacgtttat ttcacgacta gatggtctgg caaagaaaaa aacttctttt ttacatgaaa 3180 caagatttcg caacaaaacg gatttcgtgc gttcatggaa aacagacatt cctatgaaaa 3240 ggactttacg acaaaatgga cctctgaaag aaactatttc acaacgaaac aaattttgtg 3300 gacaaacttt acgaaacgtt ttattttaca atgaaactga ctttacgaag aaaaagagtt 3360 caagacggac tgaaatgaaa cagacctcca cagttgaact tcatgaagaa ctagacttta 3420 cgatggaacc gaaaaacaaa ctttatgaag aaaactactt ttcgaagaaa cttctctgga 3480 tttacttcaa cacaagaaaa ctgatttgac gcaaacttca gaagaaaaat cttctcaaag 3540 aaacttcccc aggtttttcc tgacaacaaa acggacttct caacgaaaca aagtttgcga 3600 ttaaacggac atcccgaaga agctttcccg gtttgacact gtaacaaact ttccatcaaa 3660 tgacgcgttc acttgtaaat acgacgccga aatttacagt ccgctttatt ctgcatggta 3720 gtttctttcc tgtgatgcaa acgccaactt gtaacagcac attttttcag tgttggtcac 3780 catccacacg aaatatcgca gtacagcacc ggtgaactgc caggttaaca tgttttagtg 3840 ataagcaaag tcacacacca gccagtatga attaaaacac acacaaacac tattgaccaa 3900 aataaccgtt aaaaactagt agatcgacaa aaattgggat agtttttgct ggttgtttga 3960 cattgtgtcc cggtttacct aaactagcac tctatcacag ctttcaaacg ggtttctata 4020 tgtggatatg gtaaatacct atacagtcac ggatatttct gtaaaaagta atcattcttt 4080 gtacaaaaaa aaatctattt agagtatata actagggtaa gtttttttta tttgtgttaa 4140 aaacacaaat tggccttcct tgttttactt ttgttttgcg atttacaatg gcctatattc 4200 ttgagtttgc ctgtccatta tcgagaagaa aaacaagtca aaattattat tagttctttg 4260 tgttttggaa tgaacatgca ctatagcgga gatttgacac cagatattac aacactgtac 4320 aactttttta aagtttgatt tttaatttat tttgtataca gatctttatc tctgcctgtt 4380 gatttttatg tgactattta tagaagagaa ttctttatag aggaaactat tatttatcaa 4440 agtaatttaa gtgtgagcgc atgtttgttc agagtaaaca agatttgcga aagttaaaat 4500 tgtttttatt tgtttaaaat gtaattataa actagtgtaa catatcatta taataatttc 4560 ccttatcgtc aatactctgg acaaacattg cgaacaaagt ttaatttccg aagccagcaa 4620 aaacctcatt tgatgttttt atccagtgta tgatttctgt aaacatttgc acatttgtaa 4680 atatagatgg gtctcttcta gttttccact gtaacttata cggatagatt tatgtttgcg 4740 cttttctttc gtacgtttgt acgtaaactg atggtcttca gccaagctat cgtttaaatc 4800 ttgtttcatg atgtgccttc ggatggttac tagaactatc tggtttgttt tcctttaaga 4860 aataataaaa aaacgttgaa gatggaatgc tagctagcta aacgctgaaa tagtatagct 4920 gaaatagttg cttgacgttt agcgctaagt cgttttgcca aacgtttggt ggttgttgac 4980 acacaaaaat cacaggaatg tgtgtagttg actaaagttg ttacatttgg tttacagtat 5040 aaaggacgcc accgtttcga gagtgtttgt acagcttagc tgtagctata ataatgactg 5100 tctcaacgtt ttacgatatt agattagcct aataaaacat gtggcccgta attggaacaa 5160 agcccaaatt atgtatggaa ccattgttta tttgattgtt tttaacaact gttatggttt 5220 actttgctgt taataatggt tgctttgttt aattttgcat tcgcacaaag aagttgctat 5280 taaattcatt ttggggaggg ttttcatgga gaaaacttta agaaaagatg aacggacaca 5340 gtttgttgat ttttgaggag tcagtaggat atatctttat ttttcaaata aactttttct 5400 gtgacaacag acaaaaaaaa aaaaaaaaaa aaaaaaaaa 5439 // |
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