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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC116158; SV 1; linear; mRNA; STD; MAM; 1289 BP.
XX
AC   BC116158;
XX
DT   04-MAY-2006 (Rel. 87, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 7)
XX
DE   Bos taurus chromosome 1 open reading frame 57 ortholog, mRNA (cDNA clone
DE   MGC:140669 IMAGE:8273057), complete cds.
XX
KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1289
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (02-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000013935; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000018514; Bos_taurus.
DR   ImaGenes; IMAGp998L1517922Q.
DR   ImaGenes; IRAKp961I18266Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Y. Meng, M. Taniguchi, L. Guan and S. Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 266 Row: i Column: 18.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1289
FT                   /organism="Bos taurus"
FT                   /lab_host="ElectroMAX DH10B T1 Phage Resistent cells"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-19"
FT                   /clone="MGC:140669 IMAGE:8273057"
FT                   /tissue_type="Fetal pons, Hereford, 6 month male fetus"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..1289
FT                   /gene="C28H1orf57"
FT                   /note="synonym: C1orf57"
FT   CDS             125..697
FT                   /codon_start=1
FT                   /gene="C28H1orf57"
FT                   /product="chromosome 1 open reading frame 57 ortholog"
FT                   /db_xref="GOA:Q1LZ78"
FT                   /db_xref="InterPro:IPR004948"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q1LZ78"
FT                   /protein_id="AAI16159.1"
FT                   /translation="MARHVFLTGPPGVGKTTLIQKATEVLKSSGMPVDGFYTEEVRQGG
FT                   RRIGFDVVTLSGIRGPLSRIGSEPLPGKRECRVGQYVVDLTSFEQLALPVLRNAGASGR
FT                   PGQSICVIDEVGKMELFSQPFIQAVRQVLSIPGTVVLGTIPVPKGKPLALVEEIRTRKD
FT                   VKVFSVTKENRNHLLPEIVTHMQSSRK"
XX
SQ   Sequence 1289 BP; 326 A; 292 C; 349 G; 322 T; 0 other;
     gggtggagga ggggactgcg gccctggggg acggaccctg ggtcgcgacc tctccctggt        60
     acccggctcg gcgacttcga ccccacccct acccgggccg tgaccccgac ccgagcctac       120
     ccgtatggcc cggcacgtgt tcctgactgg gcccccagga gttggaaaaa caacgctgat       180
     ccagaaagcc actgaagttt taaagtcctc tggcatgcct gttgatgggt tttatacaga       240
     agaagtcaga cagggaggaa gaagaatagg gtttgatgtt gtcacgttgt ctggcatccg       300
     aggaccttta tccagaattg ggtcagagcc tctgcctgga aagcgtgagt gccgtgtagg       360
     gcagtacgtg gtggatctga cgtcctttga gcagctggcg ctcccggtct tgaggaatgc       420
     aggggccagt ggtcgcccag gacagagcat ttgtgtcatc gatgaggtgg ggaagatgga       480
     gctcttcagt cagccattca tccaggccgt ccgccaggtg ctgtccatac cggggactgt       540
     ggtcctcggc accatccccg tacccaaagg aaaaccactg gccctcgtgg aagagatcag       600
     aacccgaaag gacgtgaagg tgttcagcgt aaccaaggag aacagaaacc accttttgcc       660
     agagattgtg acgcacatgc agagcagccg gaagtgaaga cgacgtgtca ccacttctct       720
     gcacgtgcaa acgtttcttt gagaggagcc ccagtgctct gcccgaccag gttttatgcc       780
     tttagtttat gaaaccttgg aggcttttcc aaagaaagcc tgacagctgt tttccataaa       840
     atgttttaaa agatcaaatt agccttagtg ctggattgac tctacaagat taacaatcca       900
     ctgtggtgta tttatgctga gagatttctg tttatttcct cttgcagtcg tgcgtatgat       960
     ttgggtaaat tatgaaagaa gaaatggttt tcggaatatt agatggaatt tgcccccatt      1020
     gaagtttata aatgtgttca ggggaggggg gtggggagga gttcactgcc tgatcatttt      1080
     ggcatgttag gaaaattaaa cccctccctg ggagcagctg cagcctcctg caacttggag      1140
     tgataacagt tatttgattt taagaaaatc agtatttcaa gaaaagccat tttcagtcct      1200
     tccctgcctg catcttttac tgtttatatg tttggttatt gcttaataaa ataaagagaa      1260
     atgtgatgac tgcaaaaaaa aaaaaaaaa                                        1289
//
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