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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC116126; SV 1; linear; mRNA; STD; MAM; 1449 BP.
XX
AC   BC116126;
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DT   04-MAY-2006 (Rel. 87, Created)
DT   12-JUN-2008 (Rel. 96, Last updated, Version 5)
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DE   Bos taurus carbonic anhydrase I, mRNA (cDNA clone MGC:139003
DE   IMAGE:8094389), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
XX
RN   [1]
RC   NIH-MGC Project
RP   1-1449
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (02-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000036116; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000045723; Bos_taurus.
DR   ImaGenes; IMAGp998D0317407Q.
DR   ImaGenes; IRAKp961H20267Q.
XX
CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: Lee Alexander, USDA, ARS, NPA
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 267 Row: h Column: 20.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1449
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="L1 Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-17"
FT                   /clone="MGC:139003 IMAGE:8094389"
FT                   /tissue_type="Ascending colon, 6 month male fetus, L1
FT                   Hereford"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:9913"
FT   gene            1..1449
FT                   /gene="CA1"
FT   CDS             68..853
FT                   /codon_start=1
FT                   /gene="CA1"
FT                   /product="carbonic anhydrase I"
FT                   /db_xref="GOA:Q1LZA1"
FT                   /db_xref="InterPro:IPR018442"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q1LZA1"
FT                   /protein_id="AAI16127.1"
FT                   /translation="MASPDWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSL
FT                   KPLSVSYNPATAKEIVNVGHSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDC
FT                   GSEHLVDGAKFSAELHLVHWNSAKYPSFADAASQADGLALIGVLVKVGQANPNLQKVLD
FT                   ALKAVKNKNKKAPFTNFDPSVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISVSSE
FT                   QLAQFRSLLANAEGDREVHIKQNNRPPQPLNGRTVKASF"
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SQ   Sequence 1449 BP; 435 A; 330 C; 275 G; 409 T; 0 other;
     ctcagttaca gtcagttatt ccaggtattg tctttgtttt caggaaaaga aaactaagta        60
     gaagatcatg gcaagtcctg actggggata tgatggtgaa aacggtcctg aacactgggg       120
     caagctgtac cccatcgcaa atggaaataa ccaatctcct atcgacatca aaaccagtga       180
     aaccaagcgt gatccctctc tgaaacccct cagtgtctcc tacaatccag ccacagccaa       240
     agaaatcgtc aacgtgggac attcctttca tgtaaacttt gaggacagtg ataatagatc       300
     agtgctgaaa gggggtcctc tatctgaaag ctacaggctg cggcagttcc attttcactg       360
     gggcatcaca gatgactgtg gctctgagca cttagtggat ggagccaaat tttctgcaga       420
     gcttcattta gttcactgga attctgccaa gtaccccagc ttcgctgatg ctgcctcgca       480
     ggctgatggt ttggcgttga ttggcgtttt ggtgaaggtg ggtcaggcca acccaaacct       540
     tcagaaagta cttgatgccc taaaagcagt taaaaataag aacaagaaag ctccattcac       600
     aaatttcgac ccctctgtcc tcctgcctcc atccctggat tactgggcct actctggttc       660
     actgactcac cctcctcttc acgagagtgt cacctggatc atctttaaag agaccatcag       720
     tgtgagctcg gaacagctgg cgcagttccg cagtctgctg gcaaatgctg aaggcgatag       780
     agaagtccac atcaagcaga acaaccgacc accccagcct ctgaacggca ggacagtgaa       840
     agcttcattc tgaagggccc aagaggaagc tcatcttccc tcaagaagca cagctctgct       900
     tctgacataa tcctagaaaa caagctttaa aaacacgttt atttcaatac tagcaagaca       960
     gcctgcttgc gaatttactc tgcagaatgc aaaatctttt tcttctttct gttgagctca      1020
     aatagtaatc tggaagttca ctaaacttga gcttaaattc aaatctattg cattgacttc      1080
     cttatcttgc aattaaggca tacttgattt cttaatgact tttatccctt cccattttat      1140
     tccgtttaat tggaccaaaa agcattttat cccctttttc ttgtctatta tgtactatac      1200
     ttttaaatgg cattaggttt ctactctatt tacatttgag aatcttatgc tttcatttgc      1260
     aacattattc tgatgcaata tcaggtctat tactcaaata taatgaccta agagcagctt      1320
     gagatgaaat gttaagaatt catttgctta ctcttgaaga caaatatgca gctacaatga      1380
     caactggatt ttatattatg atgaaataaa tggcccaaca ttgcaaaaaa aaaaaaaaaa      1440
     aaaaaaaaa                                                              1449
//
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