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EBI DbfetchID BC114305; SV 1; linear; mRNA; STD; VRT; 1348 BP. XX AC BC114305; XX DT 03-MAR-2006 (Rel. 87, Created) DT 25-JUL-2006 (Rel. 88, Last updated, Version 3) XX DE Danio rerio zgc:136906, mRNA (cDNA clone MGC:136906 IMAGE:7993820), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1348 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1348 RG NIH MGC Project RA ; RT ; RL Submitted (01-MAR-2006) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998E1817146Q. DR ImaGenes; IRAKp961K02260Q. DR ImaGenes; IRBOp991B0479D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 260 Row: k Column: 2 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 89130623. XX FH Key Location/Qualifiers FH FT source 1..1348 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_7" FT /clone="MGC:136906 IMAGE:7993820" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..1348 FT /gene="zgc:136906" FT CDS 83..652 FT /codon_start=1 FT /gene="zgc:136906" FT /product="zgc:136906" FT /db_xref="GOA:Q29RA3" FT /db_xref="HSSP:2ESB" FT /db_xref="InterPro:IPR000340" FT /db_xref="InterPro:IPR000387" FT /db_xref="InterPro:IPR016130" FT /db_xref="InterPro:IPR020405" FT /db_xref="InterPro:IPR020417" FT /db_xref="InterPro:IPR020422" FT /db_xref="UniProtKB/Swiss-Prot:Q29RA3" FT /db_xref="ZFIN:ZDB-GENE-060312-23" FT /protein_id="AAI14306.1" FT /translation="MSSAQAEDEQDYETPSCYELQKHFTHGGVAYTHVNEVWPGVYIGN FT EETARDRYKLQTLGITHILNAAEGEWNSVDTGAEYYKDMQIHYYGVTAEDTPTFNISQY FT FYSAAEYIQQTLSDPHNKLLLHCVMGRSRSATLFLAFLMLQQRMSLLQAVEQLAHRRHI FT CPNWGFLKQLRELDTHLQEERRRTHT" XX SQ Sequence 1348 BP; 417 A; 301 C; 309 G; 321 T; 0 other; cacctgtaaa agagactgaa gtggggtttc tgagggtgct gcggatggtt tcagagctgt 60 gtgtgggggg atactcctga agatgagctc tgcacaggct gaagacgagc aggactacga 120 gacgcccagc tgctatgagc tgcagaaaca cttcacacac ggcggcgtcg catacactca 180 cgtcaacgag gtctggcctg gtgtctacat agggaacgaa gagacggcga gggaccgata 240 taagctgcag accctgggca tcacacacat cctgaacgcg gcggagggcg agtggaacag 300 tgtggacacc ggcgctgaat attataaaga tatgcagatt cattactatg gcgtcacagc 360 ggaggacacg cccactttca acatcagcca atacttttac agcgcagcag agtacatcca 420 gcagaccctc agtgacccgc acaataagct gctcctgcac tgtgtgatgg gccgcagccg 480 ctccgccaca ctcttcctgg cgttcctgat gctccagcag aggatgagtc tcctgcaggc 540 tgtagagcag ctcgctcacc gcagacacat ctgccctaac tggggcttcc tgaagcagct 600 gagagagctg gacacacacc tgcaggagga gcggaggcgc acacacacct gacacacaca 660 cacctgcagg aggagcggag gcgcacacac acctgacaca aacacacaca cctacaggag 720 gagcggaggc gcacacacac ctgtcacaaa cacacacaca gcgcttcaca gtcagcaggt 780 ccatgtgcag gaggtcagct agggttcaga ggtcagcagg tgatagtcaa gtgcagatgt 840 ggagactgat gttcagtgac agtagagacg gataattaac tcaatatata ctgaatgctg 900 gagttctgct gtgtcagctc tattgctgat attaatatag gtaaaatgat catcaatata 960 aacagattaa tcaatagtta aacagcagaa aaaatatatt tttgttattt atttattttt 1020 atgaataata aaatgttatc ttaggaattg tttgacaaaa ccttctctgt tgtccatcag 1080 tttttcttct agtttaggtc atgttcatta tattattatt tctacacaat gaaaataata 1140 ctgttcaaaa tattgcagca cacacacaaa cacacacaca atactatttc agtgtatttc 1200 agaattgctt cgctgtttgg tgctttgtca tttattgtga tatttaatca aattcgtaat 1260 aataaaaata tttgtacatt tttgatttgt aggtcaataa aacatatttt gccgtaaaaa 1320 aaaaaaaaaa aaaaaaaaaa aaaaaaaa 1348 // |
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