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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC114149; SV 1; linear; mRNA; STD; MAM; 902 BP.
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AC   BC114149;
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DT   02-MAR-2006 (Rel. 87, Created)
DT   02-NOV-2007 (Rel. 93, Last updated, Version 6)
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DE   Bos taurus nudix (nucleoside diphosphate linked moiety X)-type motif 2,
DE   mRNA (cDNA clone MGC:137572 IMAGE:8165860), complete cds.
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KW   MGC.
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OS   Bos taurus (cattle)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
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RN   [1]
RC   NIH-MGC Project
RP   1-902
RA   Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
RA   Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
RA   Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
RA   Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
RA   Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D., Siddiqui A.,
RA   Holt R., Jones S.J., Marra M.A.;
RT   ;
RL   Submitted (27-FEB-2006) to the EMBL/GenBank/DDBJ databases.
RL   BC Cancer Agency, Canada's Michael Smith Genome Sciences Centre, Suite 100,
RL   570 West 7th Avenue, Vancouver, British Columbia V5Z 4S6, Canada
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DR   Ensembl-Gn; ENSBTAG00000031793; Bos_taurus.
DR   Ensembl-Tr; ENSBTAT00000045076; Bos_taurus.
DR   ImaGenes; IMAGp998J0217644Q.
DR   ImaGenes; IRAKp961D22263Q.
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CC   Contact: Robert Kirkpatrick
CC   Canada's Michael Smith Genome Sciences Centre
CC   BC Cancer Agency
CC   Suite 100, 570 West 7th Avenue, Vancouver, British Columbia,
CC   Canada, V5Z 4S6
CC   Tel: 1-604-707-5900 x5406
CC   Fax: 1-604-876-3561
CC   Email: robertk@bcgsc.ca
CC   Tissue Procurement: M. Taniguchi, Y. Meng, S. Lobo, L. Guan and S.
CC   Moore
CC   cDNA Library Preparation: M. Masaaki, Y. Meng, S. Lobo,  L. Guan
CC   and Dr. S. Moore
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Bovine Genome Sequencing Program, Genome
CC   Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Moore S, Alexander L, Brownstein M, Guan L, Lobo S, Meng Y,
CC   Tanaguchi M, Wang Z, Prange C, Schreiber K, Shenmen C, Wagner L,
CC   Ali J, Chun E, Liao N, Beland J, Cruz K, Featherstone R, Kirk H,
CC   Matsuo C, Mayo M, Moore R, Munro S, Roger J, Tam B, Trinh E, Sze W,
CC   Wilton J, Wanger S, Huang P, Chu B, Imanian B, Roscoe R, Holt R,
CC   Jones S, Marra M
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 263 Row: d Column: 22.
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FH   Key             Location/Qualifiers
FH
FT   source          1..902
FT                   /organism="Bos taurus"
FT                   /lab_host="DH10B"
FT                   /strain="Hereford"
FT                   /mol_type="mRNA"
FT                   /clone_lib="GC_BGC-11"
FT                   /clone="MGC:137572 IMAGE:8165860"
FT                   /tissue_type="Hypothalamus, 8.5 month female Hereford"
FT                   /note="Vector: pCMV-SPORT6.0"
FT                   /db_xref="taxon:9913"
FT   gene            1..902
FT                   /gene="NUDT2"
FT   CDS             84..527
FT                   /codon_start=1
FT                   /gene="NUDT2"
FT                   /product="nudix (nucleoside diphosphate linked moiety
FT                   X)-type motif 2"
FT                   /db_xref="GOA:Q29RJ1"
FT                   /db_xref="InterPro:IPR000086"
FT                   /db_xref="InterPro:IPR003565"
FT                   /db_xref="InterPro:IPR015797"
FT                   /db_xref="InterPro:IPR020084"
FT                   /db_xref="InterPro:IPR020476"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q29RJ1"
FT                   /protein_id="AAI14150.1"
FT                   /translation="MALRACGLIIFRRRLIPKVDNTAIEFLLLQASDGIHHWTPPKGHV
FT                   EPGESDLETALRETQEEAGIEAGQLTIIEGFRRELSYVARAKPKIVIYWLAEVKDCDVE
FT                   VRLSREHQAYRWLELEDACQLAQFEEMKAALQEGHQFLCSTAT"
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SQ   Sequence 902 BP; 294 A; 207 C; 217 G; 184 T; 0 other;
     gtacccagct cttgggattg gtcgacggac tgccagtttt cgccgaaggt ccgccttttg        60
     cctccttcta cttgtgatag accatggccc tgagagcatg tggcttgatc atcttccgaa       120
     gacgcctcat ccccaaggtg gacaacactg ccattgagtt tctactgcta caagcatcag       180
     atggcattca tcactggact cctcccaaag gccatgtgga accaggagaa agtgacttgg       240
     aaacagccct tcgggagacc caggaggaag caggcataga agcaggccag ctgaccatca       300
     ttgagggctt cagaagggag ctcagttacg tagccagagc gaagcctaaa atcgtcatct       360
     actggctggc ggaggtaaag gactgcgatg tggaggtccg cctctcccgc gagcaccaag       420
     cctaccgctg gctggagctg gaggatgcct gccagttggc tcagtttgag gagatgaagg       480
     ctgcactcca agaaggacac cagtttctct gctccacagc gacctgaact gaccagagtc       540
     gggccttttg cctcagtagg atcctttcag ggccttctga gatgaactgc cttcacttca       600
     cttcacttcc ttggtctttg gctcattata gcagagagca gagaggctag taaaatcagc       660
     tgaggactct cagaggagag caagcaagaa tctgagctag gtggaaagga agggaaagga       720
     ggagttttaa aaaaaaaaaa aaagcccagg tccagtgagt acctccttat actttatgaa       780
     taaagtttat gaataaactt caagcagctt ctctctccct ctaaaaaaaa aaaaaaaaaa       840
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa       900
     aa                                                                      902
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